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The map label for this gene is tsf [H]

Identifier: 89898767

GI number: 89898767

Start: 1109344

End: 1110192

Strand: Direct

Name: tsf [H]

Synonym: CF0960

Alternate gene names: 89898767

Gene position: 1109344-1110192 (Clockwise)

Preceding gene: 89898766

Following gene: 89898768

Centisome position: 95.12

GC content: 39.34

Gene sequence:

>849_bases
ATGAGCAACTTTTCTATGGAAACCCTTAAACTCTTAAGACAGCAAACCGGTGTAGGGTTAACCAAATGTAAGGAAGCTCT
AGCTGAATGTAATGGAAATCTTGAAGAGGCGGTAGTTTACTTACGCAAACTAGGCCTTGCTTCGGCCAGCAAAAAAGAAC
ATAGAGAAACAAAAGAAGGTGTTATTGCTGCAAAGAGTGATGCTCGCGGCACGGCTATTGTTGAAGTGAACGTAGAAACT
GACTTCGTTGCTAATAACGCCGTATTTCGATCTTTTGTTGATGGCCTTGTTGAAGACGTCTTAAATCATAAAGCAGACAA
TGTTGATGCTTTGCTACAACTTCCTTCTTTTCAAGATGCTTCTCTTACAGTTGATGAATTGCGCGCCGTCACTATGCAAA
CTGTCGGCGAAAACATTCGCATCAGCAGAATCAAATATTTTCCAAAAACAACAGAAGAAAGTGTTGGGATTTACTCCCAC
GGTAACGGGAAAGCTGTTTCTATCACAATTCTTTCTGGACTTTCTGATCAAGAAAGCCTTGCCAAAGACATTTCCATGCA
TATCGTTGCAGCTCAACCCCTATTTTTAAGCAAAGAAAGTGTTCCTGAAGACGCTCTAGCGAAAGAAAAAGAAATCATTT
CTTCTCAAATACAAGGGAAACCCCAAGCAGTTATTGATAAAATTATCAGTGGTAAATTGGGAACATTCTTCCAAGATGTT
TGCCTGCTAGAACAAGCCTATATTAAAAATCCTGATACAACAATTCAACATTTAATTAACGGCGTCAGCAAGACTAGTGG
CAATTCCGTCGAAGTGAAAGAATTCATTTTATGGAAAATAGGTGCTTAA

Upstream 100 bases:

>100_bases
CTTTAACTAGCGACGAAGAAGCCAATTCCTCTGCAGAAGAAAACGAAAATCGTCAAGAAGACCTATTAGCAAAAAAATAC
GACAGTAGTGAGGCTAACTA

Downstream 100 bases:

>100_bases
TAAGCAAGAGGAACTATGTCTAAACGAATAACACGAGTCTTATTTAAGATTTCTGGAGAGTCTCTCTCAACAGACAGCGG
AAACCGGATTGATGAAGTTC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSNFSMETLKLLRQQTGVGLTKCKEALAECNGNLEEAVVYLRKLGLASASKKEHRETKEGVIAAKSDARGTAIVEVNVET
DFVANNAVFRSFVDGLVEDVLNHKADNVDALLQLPSFQDASLTVDELRAVTMQTVGENIRISRIKYFPKTTEESVGIYSH
GNGKAVSITILSGLSDQESLAKDISMHIVAAQPLFLSKESVPEDALAKEKEIISSQIQGKPQAVIDKIISGKLGTFFQDV
CLLEQAYIKNPDTTIQHLINGVSKTSGNSVEVKEFILWKIGA

Sequences:

>Translated_282_residues
MSNFSMETLKLLRQQTGVGLTKCKEALAECNGNLEEAVVYLRKLGLASASKKEHRETKEGVIAAKSDARGTAIVEVNVET
DFVANNAVFRSFVDGLVEDVLNHKADNVDALLQLPSFQDASLTVDELRAVTMQTVGENIRISRIKYFPKTTEESVGIYSH
GNGKAVSITILSGLSDQESLAKDISMHIVAAQPLFLSKESVPEDALAKEKEIISSQIQGKPQAVIDKIISGKLGTFFQDV
CLLEQAYIKNPDTTIQHLINGVSKTSGNSVEVKEFILWKIGA
>Mature_281_residues
SNFSMETLKLLRQQTGVGLTKCKEALAECNGNLEEAVVYLRKLGLASASKKEHRETKEGVIAAKSDARGTAIVEVNVETD
FVANNAVFRSFVDGLVEDVLNHKADNVDALLQLPSFQDASLTVDELRAVTMQTVGENIRISRIKYFPKTTEESVGIYSHG
NGKAVSITILSGLSDQESLAKDISMHIVAAQPLFLSKESVPEDALAKEKEIISSQIQGKPQAVIDKIISGKLGTFFQDVC
LLEQAYIKNPDTTIQHLINGVSKTSGNSVEVKEFILWKIGA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=221, Percent_Identity=28.5067873303167, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI291084500, Length=242, Percent_Identity=26.4462809917355, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI291084502, Length=103, Percent_Identity=38.8349514563107, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI291084498, Length=103, Percent_Identity=38.8349514563107, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786366, Length=284, Percent_Identity=30.9859154929577, Blast_Score=137, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17561440, Length=282, Percent_Identity=26.5957446808511, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19921466, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 30709; Mature: 30578

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFSMETLKLLRQQTGVGLTKCKEALAECNGNLEEAVVYLRKLGLASASKKEHRETKEG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
VIAAKSDARGTAIVEVNVETDFVANNAVFRSFVDGLVEDVLNHKADNVDALLQLPSFQDA
EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
SLTVDELRAVTMQTVGENIRISRIKYFPKTTEESVGIYSHGNGKAVSITILSGLSDQESL
CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHH
AKDISMHIVAAQPLFLSKESVPEDALAKEKEIISSQIQGKPQAVIDKIISGKLGTFFQDV
HHHHHEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
CLLEQAYIKNPDTTIQHLINGVSKTSGNSVEVKEFILWKIGA
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHEEEEECCC
>Mature Secondary Structure 
SNFSMETLKLLRQQTGVGLTKCKEALAECNGNLEEAVVYLRKLGLASASKKEHRETKEG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
VIAAKSDARGTAIVEVNVETDFVANNAVFRSFVDGLVEDVLNHKADNVDALLQLPSFQDA
EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
SLTVDELRAVTMQTVGENIRISRIKYFPKTTEESVGIYSHGNGKAVSITILSGLSDQESL
CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHH
AKDISMHIVAAQPLFLSKESVPEDALAKEKEIISSQIQGKPQAVIDKIISGKLGTFFQDV
HHHHHEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
CLLEQAYIKNPDTTIQHLINGVSKTSGNSVEVKEFILWKIGA
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA