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The map label for this gene is hemD

Identifier: 89898590

GI number: 89898590

Start: 926337

End: 926981

Strand: Direct

Name: hemD

Synonym: CF0783

Alternate gene names: NA

Gene position: 926337-926981 (Clockwise)

Preceding gene: 89898585

Following gene: 89898591

Centisome position: 79.43

GC content: 42.33

Gene sequence:

>645_bases
ATGACTGTATATCTAGGATTAAATCAACAAACGGCTAGGAAATACCGCGCTCTTTTTGCTCCGATTCTTGAAATTGTTCC
CTTTGCAAGAAGTTCCCCCCAACTACGCCATGCTTATCTCTACTTAGAGAAGACTTCGCATATTTTACTTACTAGCCCCT
CTTCAACCTCCCTGTTCTTCTCCAGAATGAAGAAAAAATTCTCTAGAAAAACTTTGAGAAACAAACACTATCTATGTTTA
GGGAAAATCACAGCTCATCGTCTCGCACGTTGCCTGCCTAAAGCCCCCTACTCTCTAGCCGCTACTGAAACAGGAGAGGG
TGTTCTCCCCATGATTTCCTCTCTACCCAAAGAAGCGCGCATCCTTTATCCGCATTCCGCTTTATCGCGCCCCATAATTA
AAAATTTTTTAACACAAGAAAACCGATATTTTTTTGCTTATCCACACTACAGTATTCGAGAGCGCCGGTTAAGTCCGCAA
ATATTCGATCACTGTACTCGAGTAATTTTAACCAGCCCTTCAGGAGTCAGAGCTTACGCAAAACTCTTCCCTGTACTCCC
GGACAGACAACATTTCTGCCAAGGCCCCATCACCCTTAAAGAATTTCAAAAAATTTATAATCATTCTGGAGATCTGCTTC
CATAA

Upstream 100 bases:

>100_bases
CTAAGACACATACAGGGAAACTCACTATTTTCTAGGTGCGAAACAATCTTCCACTCTTTACATTAGGCTCTTTGGATTCA
TTCTAGACTAAGATGATTCA

Downstream 100 bases:

>100_bases
GAAGAACTTCCGGAAAAGCTGATGACAAAAACAGTTTTTACGATTAAAATTCTTCTGCTCTTAAGCTTTTATTCGACAGT
ACTCTGTATGTCAGTTTCGG

Product: uroporphyrinogen-III synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTVYLGLNQQTARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFFSRMKKKFSRKTLRNKHYLCL
GKITAHRLARCLPKAPYSLAATETGEGVLPMISSLPKEARILYPHSALSRPIIKNFLTQENRYFFAYPHYSIRERRLSPQ
IFDHCTRVILTSPSGVRAYAKLFPVLPDRQHFCQGPITLKEFQKIYNHSGDLLP

Sequences:

>Translated_214_residues
MTVYLGLNQQTARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFFSRMKKKFSRKTLRNKHYLCL
GKITAHRLARCLPKAPYSLAATETGEGVLPMISSLPKEARILYPHSALSRPIIKNFLTQENRYFFAYPHYSIRERRLSPQ
IFDHCTRVILTSPSGVRAYAKLFPVLPDRQHFCQGPITLKEFQKIYNHSGDLLP
>Mature_213_residues
TVYLGLNQQTARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFFSRMKKKFSRKTLRNKHYLCLG
KITAHRLARCLPKAPYSLAATETGEGVLPMISSLPKEARILYPHSALSRPIIKNFLTQENRYFFAYPHYSIRERRLSPQI
FDHCTRVILTSPSGVRAYAKLFPVLPDRQHFCQGPITLKEFQKIYNHSGDLLP

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24682; Mature: 24551

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYLGLNQQTARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFF
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHH
SRMKKKFSRKTLRNKHYLCLGKITAHRLARCLPKAPYSLAATETGEGVLPMISSLPKEAR
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCCE
ILYPHSALSRPIIKNFLTQENRYFFAYPHYSIRERRLSPQIFDHCTRVILTSPSGVRAYA
EECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHEEECCCCHHHHH
KLFPVLPDRQHFCQGPITLKEFQKIYNHSGDLLP
HHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVYLGLNQQTARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFF
EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHH
SRMKKKFSRKTLRNKHYLCLGKITAHRLARCLPKAPYSLAATETGEGVLPMISSLPKEAR
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCCE
ILYPHSALSRPIIKNFLTQENRYFFAYPHYSIRERRLSPQIFDHCTRVILTSPSGVRAYA
EECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHEEECCCCHHHHH
KLFPVLPDRQHFCQGPITLKEFQKIYNHSGDLLP
HHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA