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The map label for this gene is pmp08 [H]

Identifier: 89898533

GI number: 89898533

Start: 843623

End: 846175

Strand: Direct

Name: pmp08 [H]

Synonym: CF0726

Alternate gene names: 89898533

Gene position: 843623-846175 (Clockwise)

Preceding gene: 89898532

Following gene: 89898534

Centisome position: 72.34

GC content: 40.97

Gene sequence:

>2553_bases
ATGCAGGGAATACTAATGAAAAACTCTATTTATGGAGTTTTGCTGGTTTCCTCTTTTGCCTTATCCATTGCTACCGAACT
TCTCGCAGACGCCGATACTGTCTCTCTTGCAACTGGATTCAACGGCTCCTCTAGTAAAACTTTCACTGTCAAACAATCAA
GTAATGTTGATGGAACTACGTATAATCTCACAAACGCTGTTTCCTTTTTAAATATAAATGAGCTCAATCCAGCAAATACG
AGCTGCTTCGCAAATACCGCAGGGAACCTGACTTTTAATGGAAACCATCGACTCCTGTATTTCGATGGCGTCAAATCAAC
GGCAAAGGGCGCTGCGATCAGCACGACTGCAGATGCGAAGACGCTCACACTATCGGGATTTTTGAATCTTATTTTTTATA
TGTGCCCTAAAGAAGAGGTCGGTAATGGAGCGATTTACTCAAATAGCTCTATATTACTAAAGAACAATAGCGAAGGAAGT
TTTGGATACAATAAATCTGCGGGGAAAGGAAGTGTTATTTGTTGTGAGAAAAGCACTAGTGTTGGAGCCACCTCTCCGAC
ATTAACCATGCAGAATAATGGGGATCTCACTTTCCTAGCAAATGCGTCTAAAGCTTCTGGCGGAGCAATTTATGCTGAAA
AGCTGCTTTTATCCTCCAAAGGAGTTGTCTCGTTTCGTTCTAACGTTACTGAGGGCAAAGGAGGTGCTATCGCCATTGCT
GCCAATGGGGAAATTAGCCTATCTGCAGATAGTGGAAATATCTTGTTTGAAAGAAATATCCTAGTTGAAAACAATGAGAA
TATTCGCAATGCCATTCATTTAGACAACAATGCGAAGTTTCTTCAGCTACGTGCTTCCGAAGGACGCTTTATCTATTTCT
ATGATCCCATTACATCTACAGGATCTGTAGCTGATGGGCTTACAATTAATGGTAATAACGGAGGCCCAGCTTATGAAGGC
ACCATTGTATTTTCTACAGGAGGGGACCATACCTATTCTTCTTCACCACTTTCTAAACTCACTACATTTTCCCAAGACCT
TACCTTAGCTTCAGGATCTTTGATCTTAGCAGATGGTGTGACAATAAGAGCGAAATCGTTCGAACAAAATCGCAAATCTC
TGCTTCTTATGAATCCGGGGACCCAGCTAGAGACAAGCGGAAACATTTCCATAAAGAACCTGCATCTAGATCTTAATAAC
ATGGAAAACGATCCCGTAGTAATCACGACGACAACGGATGGTTCCAGTGTCGATGTTCATGGTTCTATTGTGATGCATAC
CGATAACGAGATATTTTATAATCAAACAGCTTTAGCTCAGGAGCTTTCTTTTGAACTTCTACATATTAATGCGCCACAAT
TAAACAACATTTCTCTTAGTGATATTCCCGAAGTCCCTCTTTCCACTCTGGAATCTCACCGTGGGTATCAAGGAACATGG
AAAATTTCTTGGGCAGATCAAGATCCAGCTAACATTGGGGGTATCTCCGTTCGTTCCAATAAAAAAATGTCTCTAAATTG
GAAACCTTCAGGATATATTCCTGTTATAGGAGGCACTGGAGAATTTACCACATCCTTGGTTCCTAATAGCTTATGGAACC
TCTTTGTCGATACACGCTTTGCTCAACAAGCTATAGAGACAAACGCTATATCATCAAATAATGGCGTTTGGATTTCCTCC
CTTACAAATTCTTTCCTGAAGGGATCTACCAACAACAACCACGGTTTTCGTCATAAGAGCTCGGGATATGTTGTGGGAGG
AAAAACTGAAACTCTATATGATGACATATTTAGCGTAAGTTTTTGTCAGCTATTTGGAAGATCCAAAGATTTTGGATCAG
CAAAATCTAAGGATAAGTTCTTTTCGGGGTCTTTCTATGCTCGTCATTCCCGATGTCTTCTTCCTATTATGAGATTCCTT
GCAGGAACATCGCGATTTAGACCAAGATTTTTATTACAAATCCCCCGTGATTTTCCTATCAACTTGGATGCTCTCGTTAG
TTATAGTTATAATAGAAATCACCTAAGAGCAAAGTATTCCGATCGCTCACAAACTACAGGCGCATGGAATACTTACGGCT
ACAGTGCGCAGATTGGCAGTTCCCTACCTTTTGCTTTGGACGTTTCTCATATCTTTTTCCAATCTATCTCTCCATTTATC
AAGCTGCATTGGCTTTATGCTCATCAAGTCCAGTTCCAAGAACAAGGAATAAAACGACGTTCATTTAATAATAGTAATTT
AAAAAATCTCTCCTTACCCATTGGTCTGAAAATCCAAGGACAATCACTACATCATTTTTCTTATGAACTCACTGGGATGT
ACATTGCTGATCTCTATCGCTGCAATCCTGAGAGTGTGACTTCATTAATCTCCGGAGGTTTGCTCCCCTGGGCAACAACA
GCGACGAATCTTGGCAAACAAGCGGCTCTGTTGCAAGGATCGAGCAACCTCTCTCTCACCTCACACATCAATATCTTTGC
TCAAGGCACAGTAGAATTCCGCCGTTCCTCCTATAGCTACAACATGGATTTTGGCAGCAAGGTGCATTTTTAA

Upstream 100 bases:

>100_bases
TAGTTCCAAGCGGGGAAGATCCTCCGCATTTCCTACATCACTGCATAGCAACTCTTGCTTTATTTTCCTCTTTCCCCTAT
GTCGTATAGAGCCGCAAAAT

Downstream 100 bases:

>100_bases
CAGAGAGCATCCTGTCTGCAGACATGTACTCTAGTAAAATGCATCCCTTGATACCGAGATAATCTGCTTTTTTGCGTAGG
CATAATTTACAAAGTTATGC

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Outer membrane protein 4; Polymorphic membrane protein 11 [H]

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MQGILMKNSIYGVLLVSSFALSIATELLADADTVSLATGFNGSSSKTFTVKQSSNVDGTTYNLTNAVSFLNINELNPANT
SCFANTAGNLTFNGNHRLLYFDGVKSTAKGAAISTTADAKTLTLSGFLNLIFYMCPKEEVGNGAIYSNSSILLKNNSEGS
FGYNKSAGKGSVICCEKSTSVGATSPTLTMQNNGDLTFLANASKASGGAIYAEKLLLSSKGVVSFRSNVTEGKGGAIAIA
ANGEISLSADSGNILFERNILVENNENIRNAIHLDNNAKFLQLRASEGRFIYFYDPITSTGSVADGLTINGNNGGPAYEG
TIVFSTGGDHTYSSSPLSKLTTFSQDLTLASGSLILADGVTIRAKSFEQNRKSLLLMNPGTQLETSGNISIKNLHLDLNN
MENDPVVITTTTDGSSVDVHGSIVMHTDNEIFYNQTALAQELSFELLHINAPQLNNISLSDIPEVPLSTLESHRGYQGTW
KISWADQDPANIGGISVRSNKKMSLNWKPSGYIPVIGGTGEFTTSLVPNSLWNLFVDTRFAQQAIETNAISSNNGVWISS
LTNSFLKGSTNNNHGFRHKSSGYVVGGKTETLYDDIFSVSFCQLFGRSKDFGSAKSKDKFFSGSFYARHSRCLLPIMRFL
AGTSRFRPRFLLQIPRDFPINLDALVSYSYNRNHLRAKYSDRSQTTGAWNTYGYSAQIGSSLPFALDVSHIFFQSISPFI
KLHWLYAHQVQFQEQGIKRRSFNNSNLKNLSLPIGLKIQGQSLHHFSYELTGMYIADLYRCNPESVTSLISGGLLPWATT
ATNLGKQAALLQGSSNLSLTSHINIFAQGTVEFRRSSYSYNMDFGSKVHF

Sequences:

>Translated_850_residues
MQGILMKNSIYGVLLVSSFALSIATELLADADTVSLATGFNGSSSKTFTVKQSSNVDGTTYNLTNAVSFLNINELNPANT
SCFANTAGNLTFNGNHRLLYFDGVKSTAKGAAISTTADAKTLTLSGFLNLIFYMCPKEEVGNGAIYSNSSILLKNNSEGS
FGYNKSAGKGSVICCEKSTSVGATSPTLTMQNNGDLTFLANASKASGGAIYAEKLLLSSKGVVSFRSNVTEGKGGAIAIA
ANGEISLSADSGNILFERNILVENNENIRNAIHLDNNAKFLQLRASEGRFIYFYDPITSTGSVADGLTINGNNGGPAYEG
TIVFSTGGDHTYSSSPLSKLTTFSQDLTLASGSLILADGVTIRAKSFEQNRKSLLLMNPGTQLETSGNISIKNLHLDLNN
MENDPVVITTTTDGSSVDVHGSIVMHTDNEIFYNQTALAQELSFELLHINAPQLNNISLSDIPEVPLSTLESHRGYQGTW
KISWADQDPANIGGISVRSNKKMSLNWKPSGYIPVIGGTGEFTTSLVPNSLWNLFVDTRFAQQAIETNAISSNNGVWISS
LTNSFLKGSTNNNHGFRHKSSGYVVGGKTETLYDDIFSVSFCQLFGRSKDFGSAKSKDKFFSGSFYARHSRCLLPIMRFL
AGTSRFRPRFLLQIPRDFPINLDALVSYSYNRNHLRAKYSDRSQTTGAWNTYGYSAQIGSSLPFALDVSHIFFQSISPFI
KLHWLYAHQVQFQEQGIKRRSFNNSNLKNLSLPIGLKIQGQSLHHFSYELTGMYIADLYRCNPESVTSLISGGLLPWATT
ATNLGKQAALLQGSSNLSLTSHINIFAQGTVEFRRSSYSYNMDFGSKVHF
>Mature_850_residues
MQGILMKNSIYGVLLVSSFALSIATELLADADTVSLATGFNGSSSKTFTVKQSSNVDGTTYNLTNAVSFLNINELNPANT
SCFANTAGNLTFNGNHRLLYFDGVKSTAKGAAISTTADAKTLTLSGFLNLIFYMCPKEEVGNGAIYSNSSILLKNNSEGS
FGYNKSAGKGSVICCEKSTSVGATSPTLTMQNNGDLTFLANASKASGGAIYAEKLLLSSKGVVSFRSNVTEGKGGAIAIA
ANGEISLSADSGNILFERNILVENNENIRNAIHLDNNAKFLQLRASEGRFIYFYDPITSTGSVADGLTINGNNGGPAYEG
TIVFSTGGDHTYSSSPLSKLTTFSQDLTLASGSLILADGVTIRAKSFEQNRKSLLLMNPGTQLETSGNISIKNLHLDLNN
MENDPVVITTTTDGSSVDVHGSIVMHTDNEIFYNQTALAQELSFELLHINAPQLNNISLSDIPEVPLSTLESHRGYQGTW
KISWADQDPANIGGISVRSNKKMSLNWKPSGYIPVIGGTGEFTTSLVPNSLWNLFVDTRFAQQAIETNAISSNNGVWISS
LTNSFLKGSTNNNHGFRHKSSGYVVGGKTETLYDDIFSVSFCQLFGRSKDFGSAKSKDKFFSGSFYARHSRCLLPIMRFL
AGTSRFRPRFLLQIPRDFPINLDALVSYSYNRNHLRAKYSDRSQTTGAWNTYGYSAQIGSSLPFALDVSHIFFQSISPFI
KLHWLYAHQVQFQEQGIKRRSFNNSNLKNLSLPIGLKIQGQSLHHFSYELTGMYIADLYRCNPESVTSLISGGLLPWATT
ATNLGKQAALLQGSSNLSLTSHINIFAQGTVEFRRSSYSYNMDFGSKVHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 92270; Mature: 92270

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGILMKNSIYGVLLVSSFALSIATELLADADTVSLATGFNGSSSKTFTVKQSSNVDGTT
CCCEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCE
YNLTNAVSFLNINELNPANTSCFANTAGNLTFNGNHRLLYFDGVKSTAKGAAISTTADAK
EEHHHEEEEEEECCCCCCCCEEEECCCCCEEECCCEEEEEECCCCCCCCCCEEEECCCCE
TLTLSGFLNLIFYMCPKEEVGNGAIYSNSSILLKNNSEGSFGYNKSAGKGSVICCEKSTS
EEEHHHHHHHHEEECCHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCC
VGATSPTLTMQNNGDLTFLANASKASGGAIYAEKLLLSSKGVVSFRSNVTEGKGGAIAIA
CCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCCCEEEEE
ANGEISLSADSGNILFERNILVENNENIRNAIHLDNNAKFLQLRASEGRFIYFYDPITST
ECCEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCC
GSVADGLTINGNNGGPAYEGTIVFSTGGDHTYSSSPLSKLTTFSQDLTLASGSLILADGV
CCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEECCCEEEECCE
TIRAKSFEQNRKSLLLMNPGTQLETSGNISIKNLHLDLNNMENDPVVITTTTDGSSVDVH
EEEECCCCCCCCEEEEECCCCCEECCCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEEE
GSIVMHTDNEIFYNQTALAQELSFELLHINAPQLNNISLSDIPEVPLSTLESHRGYQGTW
EEEEEEECCEEEECHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
KISWADQDPANIGGISVRSNKKMSLNWKPSGYIPVIGGTGEFTTSLVPNSLWNLFVDTRF
EEEECCCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCCEEHHHCCHHHHHHHHHHHH
AQQAIETNAISSNNGVWISSLTNSFLKGSTNNNHGFRHKSSGYVVGGKTETLYDDIFSVS
HHHHHHHCCCCCCCCEEEEHHHHHHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH
FCQLFGRSKDFGSAKSKDKFFSGSFYARHSRCLLPIMRFLAGTSRFRPRFLLQIPRDFPI
HHHHHCCCCCCCCCCCCCCEECCCEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
NLDALVSYSYNRNHLRAKYSDRSQTTGAWNTYGYSAQIGSSLPFALDVSHIFFQSISPFI
CHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCEE
KLHWLYAHQVQFQEQGIKRRSFNNSNLKNLSLPIGLKIQGQSLHHFSYELTGMYIADLYR
EEEEEEEEEEEHHHCCCHHCCCCCCCCCEEECEEEEEECCCCEEEEEEEEEEEEEEEEEE
CNPESVTSLISGGLLPWATTATNLGKQAALLQGSSNLSLTSHINIFAQGTVEFRRSSYSY
CCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEECEEEEEECCEEE
NMDFGSKVHF
CCCCCCCCCC
>Mature Secondary Structure
MQGILMKNSIYGVLLVSSFALSIATELLADADTVSLATGFNGSSSKTFTVKQSSNVDGTT
CCCEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCE
YNLTNAVSFLNINELNPANTSCFANTAGNLTFNGNHRLLYFDGVKSTAKGAAISTTADAK
EEHHHEEEEEEECCCCCCCCEEEECCCCCEEECCCEEEEEECCCCCCCCCCEEEECCCCE
TLTLSGFLNLIFYMCPKEEVGNGAIYSNSSILLKNNSEGSFGYNKSAGKGSVICCEKSTS
EEEHHHHHHHHEEECCHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCC
VGATSPTLTMQNNGDLTFLANASKASGGAIYAEKLLLSSKGVVSFRSNVTEGKGGAIAIA
CCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCCCEEEEE
ANGEISLSADSGNILFERNILVENNENIRNAIHLDNNAKFLQLRASEGRFIYFYDPITST
ECCEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCC
GSVADGLTINGNNGGPAYEGTIVFSTGGDHTYSSSPLSKLTTFSQDLTLASGSLILADGV
CCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEECCCEEEECCE
TIRAKSFEQNRKSLLLMNPGTQLETSGNISIKNLHLDLNNMENDPVVITTTTDGSSVDVH
EEEECCCCCCCCEEEEECCCCCEECCCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEEE
GSIVMHTDNEIFYNQTALAQELSFELLHINAPQLNNISLSDIPEVPLSTLESHRGYQGTW
EEEEEEECCEEEECHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
KISWADQDPANIGGISVRSNKKMSLNWKPSGYIPVIGGTGEFTTSLVPNSLWNLFVDTRF
EEEECCCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCCEEHHHCCHHHHHHHHHHHH
AQQAIETNAISSNNGVWISSLTNSFLKGSTNNNHGFRHKSSGYVVGGKTETLYDDIFSVS
HHHHHHHCCCCCCCCEEEEHHHHHHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH
FCQLFGRSKDFGSAKSKDKFFSGSFYARHSRCLLPIMRFLAGTSRFRPRFLLQIPRDFPI
HHHHHCCCCCCCCCCCCCCEECCCEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
NLDALVSYSYNRNHLRAKYSDRSQTTGAWNTYGYSAQIGSSLPFALDVSHIFFQSISPFI
CHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCEE
KLHWLYAHQVQFQEQGIKRRSFNNSNLKNLSLPIGLKIQGQSLHHFSYELTGMYIADLYR
EEEEEEEEEEEHHHCCCHHCCCCCCCCCEEECEEEEEECCCCEEEEEEEEEEEEEEEEEE
CNPESVTSLISGGLLPWATTATNLGKQAALLQGSSNLSLTSHINIFAQGTVEFRRSSYSY
CCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEECEEEEEECCEEE
NMDFGSKVHF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9864239; 10539856; 10192388; 10684935; 10871362 [H]