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The map label for this gene is pmp09 [H]

Identifier: 89898534

GI number: 89898534

Start: 846328

End: 848859

Strand: Direct

Name: pmp09 [H]

Synonym: CF0727

Alternate gene names: 89898534

Gene position: 846328-848859 (Clockwise)

Preceding gene: 89898533

Following gene: 89898535

Centisome position: 72.57

GC content: 41.59

Gene sequence:

>2532_bases
ATGAAAAACTCTCTCTACGGGTTTTTAATCTTTTCTTCTTTTACTGCATCTATAGCGTTTCATAATTATGCAAACGCTGA
AGACCTAGCTTCTTCGGCAAGCTTCGACGGTTCCACAGGGAATGGGCAATTTACTGCTAAGCAATCATCAGCTGGAGGGG
GCACCACATATACTCTCACTGGGGATGTAAGCATTGCCCATGTCAAAACCATAAACCCGGCCAATACGAGCTGTTTTAAA
AATACTACAGGGAATATCACATTCACAGGAGCTGACCATTCCTTATTGTTTGAGGACATCACTTCTACAGCTCAAGGAGC
TGCTATCAGTACAAATACTGATGGGAAAACACTTACGATGTCAGGATTCAATGTCCTATCATTTATCTCTGCGCCCAATG
CTGCTACGGGAAAAGCAGCTATTTATGGCATTGCATCGATAACTATCAAAGACAACAAGCAGTTAGTCTTTGATAAAAAT
AGTTCTACAGCAGCTGGCGGTGCTATTCACTGCGCGAAAACAGGGGCAACTGTAGCAACGCTAACCTTACAGAGCAACGA
ATCTATGACCTTTAGGGACAACTTCTCAGCGACTACGGGAGGCGCTATCCATGCAGAGAAGCTTATTCTTAAAACGGGAG
GCACTACTATTTTTGAAAATAACCATGCCACACAAAAGGGCGGAGCTATTTCCATAGTTGGATCTGGCGAGATTAGCCTA
CTTGCAGAAGATGGAAATATTATTTTTAGAGGGAACACTATCACCGATGCTGGCAATAAGGTAAACAATGCGATTCATGT
AGCAGCAAACGGTAAATTTTCAAAACTTGGAGCTAAAGAATCGCAGTCTATCCTATTTTATGATCCTGTTGTTGTTGAAG
GTACATCTGCAGAGAATCTAGAAATCAATAAAACAGACGGAGGCACAAGCTATACGGGTTCGATCATCTTTTCAGGAAGG
TATATCCCTAGTACTCAAGAAATAATGAAGCATGTTTCTAAATTTTCCCAACCTATTACCCTATCCGCAGGATCTTTAGT
TTTAGAAAAAGGAGCCCATCTAGAGGCTAAATCTCTAACACAAACGGCTGGATCTAAAGTTATCTTAGATCAAACATCCA
GTATAGAAACAAAAGAAAACCTAGATATTAAAGAGCTTTGGTTACGTCTTGAGGATTTCACCAACCCTACAGCCACAAAA
ATTTCTACAGCCGGCAATGCCCATACTGTTACGGTACAAGGACCTTTGGGAATCTTTGCTGATCATGAAACCTTCTATGC
CAATCAATCTCTTGCTCACAATGTAGATCAAGAATTGCTAAAACTGGTAGATAAAGACATCACAAAAATCACGCTCGTTG
ATGTTCCTGAAGATGTGAGGAAAAACATGGATTCTCATCGTGGGTATCAAGGAAGCTGGACTGTAGATTGGAAAAGCGTT
CCAGGATCTTCAGATGGAGGAGTTGAAACTCCAGGCACGAAAACAGCCTCTATTCATTGGAAACCTACGGGCTATATTCC
TTTTGGAGGATCTCAAGAAATTACCACTCCCATTGTGCTTAACACTCTATGGGGAAATGCCTCAGACATGTGTAATTTAG
AAAGAGTGGTAGGATCTTTAGCTGTAAACTCTATGTTCTCCGAAGGCTTTTGGGCTACAGGAATTAAAAGCTTCCTACGT
TCTAACGGCCCGGCAACAAATTATGATTTCCAACATAGCAATGCGGGTTACGTCATTGGCATGAGTAAGATTTCACCTTT
AGGGAAAGTCTTTTCCGCCGCATTTTCTCAGTTATTTGGTAAGGACTGTGATGGTGCCAATGGTCAGGTAAATCATCAAA
CACTTGCGGGATCCTTATATGCGCATCACGTAGGTTCATTACCTATGTTACGCTTCCTTTGTGGAGGATCTACAGACTGC
CCTCCTGAACTTCAAGTAACTCCTTCTATCCCTGTTATTATTAATGCTCAGATAAGCTATAGCCATAGCCATAACCACAT
GACAATCAGCCATGAGGACAAAACGAAAACTACTGGATCCTGGTCCAATTACTCAGTAGCTTCGGAATTAGGATCAACAT
TCGAGTATACTTTGAACCGATGTCCCTCGCTATTAAGGCATGTATCTCCATTTATTAAGCTTCAGGGAGTGTACTCTGAG
CTAAGGAAATTTACAGAACAAGGACTACGTTGTTGCATGTTCTCAAACACATATCTAGCCAACCTAGCCCTTCCTTTAGG
GGTCAAGATTCACGGCGTATGCCCTAAAGAGCTATTCGCTTATGATCTCTCTGCTATGTATGTTTACGATGTATTCCGCA
TCAATCCTGAAAGCATGACGTTATTCTTAATAGGAGGCTTAACTCCGTGGTCAACACCAGCAACAAACCTCGACACTAAG
GCTATAGTTGTTCAAGGCTCCGGAATATTTGCTGTACGACCTAATATTGAAATTTTCGCTGAAGGCAACTGTGAACTACG
CTCCTCATCTCATAGTTACAACTATGATTTTGGCGCTAAAATACATTTTTAG

Upstream 100 bases:

>100_bases
ACCGAGATAATCTGCTTTTTTGCGTAGGCATAATTTACAAAGTTATGCCCACGCCCACAAGCAGCAACATTTTTTCCTAT
AACAAAACAGGGAATGTACT

Downstream 100 bases:

>100_bases
ATCTCCCTTACTCCCTGTTTCTTAGAAGTGGGGAGTTTTCCTTTTACATCTAAAGTCTCTATGACAATCTTGAAATTTTT
TATTTTTTAGGTTATTGCGC

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Outer membrane protein 4; Polymorphic membrane protein 11 [H]

Number of amino acids: Translated: 843; Mature: 843

Protein sequence:

>843_residues
MKNSLYGFLIFSSFTASIAFHNYANAEDLASSASFDGSTGNGQFTAKQSSAGGGTTYTLTGDVSIAHVKTINPANTSCFK
NTTGNITFTGADHSLLFEDITSTAQGAAISTNTDGKTLTMSGFNVLSFISAPNAATGKAAIYGIASITIKDNKQLVFDKN
SSTAAGGAIHCAKTGATVATLTLQSNESMTFRDNFSATTGGAIHAEKLILKTGGTTIFENNHATQKGGAISIVGSGEISL
LAEDGNIIFRGNTITDAGNKVNNAIHVAANGKFSKLGAKESQSILFYDPVVVEGTSAENLEINKTDGGTSYTGSIIFSGR
YIPSTQEIMKHVSKFSQPITLSAGSLVLEKGAHLEAKSLTQTAGSKVILDQTSSIETKENLDIKELWLRLEDFTNPTATK
ISTAGNAHTVTVQGPLGIFADHETFYANQSLAHNVDQELLKLVDKDITKITLVDVPEDVRKNMDSHRGYQGSWTVDWKSV
PGSSDGGVETPGTKTASIHWKPTGYIPFGGSQEITTPIVLNTLWGNASDMCNLERVVGSLAVNSMFSEGFWATGIKSFLR
SNGPATNYDFQHSNAGYVIGMSKISPLGKVFSAAFSQLFGKDCDGANGQVNHQTLAGSLYAHHVGSLPMLRFLCGGSTDC
PPELQVTPSIPVIINAQISYSHSHNHMTISHEDKTKTTGSWSNYSVASELGSTFEYTLNRCPSLLRHVSPFIKLQGVYSE
LRKFTEQGLRCCMFSNTYLANLALPLGVKIHGVCPKELFAYDLSAMYVYDVFRINPESMTLFLIGGLTPWSTPATNLDTK
AIVVQGSGIFAVRPNIEIFAEGNCELRSSSHSYNYDFGAKIHF

Sequences:

>Translated_843_residues
MKNSLYGFLIFSSFTASIAFHNYANAEDLASSASFDGSTGNGQFTAKQSSAGGGTTYTLTGDVSIAHVKTINPANTSCFK
NTTGNITFTGADHSLLFEDITSTAQGAAISTNTDGKTLTMSGFNVLSFISAPNAATGKAAIYGIASITIKDNKQLVFDKN
SSTAAGGAIHCAKTGATVATLTLQSNESMTFRDNFSATTGGAIHAEKLILKTGGTTIFENNHATQKGGAISIVGSGEISL
LAEDGNIIFRGNTITDAGNKVNNAIHVAANGKFSKLGAKESQSILFYDPVVVEGTSAENLEINKTDGGTSYTGSIIFSGR
YIPSTQEIMKHVSKFSQPITLSAGSLVLEKGAHLEAKSLTQTAGSKVILDQTSSIETKENLDIKELWLRLEDFTNPTATK
ISTAGNAHTVTVQGPLGIFADHETFYANQSLAHNVDQELLKLVDKDITKITLVDVPEDVRKNMDSHRGYQGSWTVDWKSV
PGSSDGGVETPGTKTASIHWKPTGYIPFGGSQEITTPIVLNTLWGNASDMCNLERVVGSLAVNSMFSEGFWATGIKSFLR
SNGPATNYDFQHSNAGYVIGMSKISPLGKVFSAAFSQLFGKDCDGANGQVNHQTLAGSLYAHHVGSLPMLRFLCGGSTDC
PPELQVTPSIPVIINAQISYSHSHNHMTISHEDKTKTTGSWSNYSVASELGSTFEYTLNRCPSLLRHVSPFIKLQGVYSE
LRKFTEQGLRCCMFSNTYLANLALPLGVKIHGVCPKELFAYDLSAMYVYDVFRINPESMTLFLIGGLTPWSTPATNLDTK
AIVVQGSGIFAVRPNIEIFAEGNCELRSSSHSYNYDFGAKIHF
>Mature_843_residues
MKNSLYGFLIFSSFTASIAFHNYANAEDLASSASFDGSTGNGQFTAKQSSAGGGTTYTLTGDVSIAHVKTINPANTSCFK
NTTGNITFTGADHSLLFEDITSTAQGAAISTNTDGKTLTMSGFNVLSFISAPNAATGKAAIYGIASITIKDNKQLVFDKN
SSTAAGGAIHCAKTGATVATLTLQSNESMTFRDNFSATTGGAIHAEKLILKTGGTTIFENNHATQKGGAISIVGSGEISL
LAEDGNIIFRGNTITDAGNKVNNAIHVAANGKFSKLGAKESQSILFYDPVVVEGTSAENLEINKTDGGTSYTGSIIFSGR
YIPSTQEIMKHVSKFSQPITLSAGSLVLEKGAHLEAKSLTQTAGSKVILDQTSSIETKENLDIKELWLRLEDFTNPTATK
ISTAGNAHTVTVQGPLGIFADHETFYANQSLAHNVDQELLKLVDKDITKITLVDVPEDVRKNMDSHRGYQGSWTVDWKSV
PGSSDGGVETPGTKTASIHWKPTGYIPFGGSQEITTPIVLNTLWGNASDMCNLERVVGSLAVNSMFSEGFWATGIKSFLR
SNGPATNYDFQHSNAGYVIGMSKISPLGKVFSAAFSQLFGKDCDGANGQVNHQTLAGSLYAHHVGSLPMLRFLCGGSTDC
PPELQVTPSIPVIINAQISYSHSHNHMTISHEDKTKTTGSWSNYSVASELGSTFEYTLNRCPSLLRHVSPFIKLQGVYSE
LRKFTEQGLRCCMFSNTYLANLALPLGVKIHGVCPKELFAYDLSAMYVYDVFRINPESMTLFLIGGLTPWSTPATNLDTK
AIVVQGSGIFAVRPNIEIFAEGNCELRSSSHSYNYDFGAKIHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 90138; Mature: 90138

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSLYGFLIFSSFTASIAFHNYANAEDLASSASFDGSTGNGQFTAKQSSAGGGTTYTLT
CCCCEEEEEEEECHHHEEEECCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEE
GDVSIAHVKTINPANTSCFKNTTGNITFTGADHSLLFEDITSTAQGAAISTNTDGKTLTM
CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCEEEE
SGFNVLSFISAPNAATGKAAIYGIASITIKDNKQLVFDKNSSTAAGGAIHCAKTGATVAT
CCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEE
LTLQSNESMTFRDNFSATTGGAIHAEKLILKTGGTTIFENNHATQKGGAISIVGSGEISL
EEEECCCCEEEECCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEE
LAEDGNIIFRGNTITDAGNKVNNAIHVAANGKFSKLGAKESQSILFYDPVVVEGTSAENL
EEECCCEEEECCEECCCCCCCCCEEEEEECCCEEECCCCCCCCEEEECCEEEECCCCCCE
EINKTDGGTSYTGSIIFSGRYIPSTQEIMKHVSKFSQPITLSAGSLVLEKGAHLEAKSLT
EEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHH
QTAGSKVILDQTSSIETKENLDIKELWLRLEDFTNPTATKISTAGNAHTVTVQGPLGIFA
HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEE
DHETFYANQSLAHNVDQELLKLVDKDITKITLVDVPEDVRKNMDSHRGYQGSWTVDWKSV
CCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCHHHHCCCCCEEEEEEECC
PGSSDGGVETPGTKTASIHWKPTGYIPFGGSQEITTPIVLNTLWGNASDMCNLERVVGSL
CCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
AVNSMFSEGFWATGIKSFLRSNGPATNYDFQHSNAGYVIGMSKISPLGKVFSAAFSQLFG
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHC
KDCDGANGQVNHQTLAGSLYAHHVGSLPMLRFLCGGSTDCPPELQVTPSIPVIINAQISY
CCCCCCCCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEE
SHSHNHMTISHEDKTKTTGSWSNYSVASELGSTFEYTLNRCPSLLRHVSPFIKLQGVYSE
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHEEHHHHHH
LRKFTEQGLRCCMFSNTYLANLALPLGVKIHGVCPKELFAYDLSAMYVYDVFRINPESMT
HHHHHHHCCEEEEECCCEEEEEEEECCEEEECCCHHHHHHHHHHEEEEEEEEEECCCCEE
LFLIGGLTPWSTPATNLDTKAIVVQGSGIFAVRPNIEIFAEGNCELRSSSHSYNYDFGAK
EEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEEECCCEEEECCCCCCCCCCCEE
IHF
EEC
>Mature Secondary Structure
MKNSLYGFLIFSSFTASIAFHNYANAEDLASSASFDGSTGNGQFTAKQSSAGGGTTYTLT
CCCCEEEEEEEECHHHEEEECCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEE
GDVSIAHVKTINPANTSCFKNTTGNITFTGADHSLLFEDITSTAQGAAISTNTDGKTLTM
CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCEEEE
SGFNVLSFISAPNAATGKAAIYGIASITIKDNKQLVFDKNSSTAAGGAIHCAKTGATVAT
CCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEE
LTLQSNESMTFRDNFSATTGGAIHAEKLILKTGGTTIFENNHATQKGGAISIVGSGEISL
EEEECCCCEEEECCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEE
LAEDGNIIFRGNTITDAGNKVNNAIHVAANGKFSKLGAKESQSILFYDPVVVEGTSAENL
EEECCCEEEECCEECCCCCCCCCEEEEEECCCEEECCCCCCCCEEEECCEEEECCCCCCE
EINKTDGGTSYTGSIIFSGRYIPSTQEIMKHVSKFSQPITLSAGSLVLEKGAHLEAKSLT
EEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHH
QTAGSKVILDQTSSIETKENLDIKELWLRLEDFTNPTATKISTAGNAHTVTVQGPLGIFA
HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEE
DHETFYANQSLAHNVDQELLKLVDKDITKITLVDVPEDVRKNMDSHRGYQGSWTVDWKSV
CCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCHHHHCCCCCEEEEEEECC
PGSSDGGVETPGTKTASIHWKPTGYIPFGGSQEITTPIVLNTLWGNASDMCNLERVVGSL
CCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
AVNSMFSEGFWATGIKSFLRSNGPATNYDFQHSNAGYVIGMSKISPLGKVFSAAFSQLFG
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHC
KDCDGANGQVNHQTLAGSLYAHHVGSLPMLRFLCGGSTDCPPELQVTPSIPVIINAQISY
CCCCCCCCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEE
SHSHNHMTISHEDKTKTTGSWSNYSVASELGSTFEYTLNRCPSLLRHVSPFIKLQGVYSE
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHEEHHHHHH
LRKFTEQGLRCCMFSNTYLANLALPLGVKIHGVCPKELFAYDLSAMYVYDVFRINPESMT
HHHHHHHCCEEEEECCCEEEEEEEECCEEEECCCHHHHHHHHHHEEEEEEEEEECCCCEE
LFLIGGLTPWSTPATNLDTKAIVVQGSGIFAVRPNIEIFAEGNCELRSSSHSYNYDFGAK
EEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEEECCCEEEECCCCCCCCCCCEE
IHF
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9864239; 10539856; 10192388; 10684935; 10871362 [H]