| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is pmp07 [H]
Identifier: 89898532
GI number: 89898532
Start: 840669
End: 843500
Strand: Direct
Name: pmp07 [H]
Synonym: CF0725
Alternate gene names: 89898532
Gene position: 840669-843500 (Clockwise)
Preceding gene: 89898531
Following gene: 89898533
Centisome position: 72.08
GC content: 41.28
Gene sequence:
>2832_bases ATGAAACATCCAATTTATTGGTTCCTAGTATCTTCAGGGTTGCTAGCCTCGACTTCATTGAGTCTGGCAACCCCAGTAGA AGTAACATTGCCTTCAACAGATAGCTACAACGGCAATAATTCAGCAAGCACCCCCTTCACACCAAAAGATACGTCTGATA GCACGGGAACACAGTACAATTGTACTGGAGATGTTTGTATCGCTAATGCCGATACCAATAGTAAAAGTTGTTTCTCTCAA AGTGTTGGAGATCTTTCTTTTATGGGTAATGGGTACTCTCTTTGTTTCGAAAGCATCACCGCCACAGGGAAACCCGGAGC CATTGAGACTACTGCTAGTGATAAAAACGTATCTATCTCAAATTTCTCTATGTTCAACTGCTCCTTCTGTCCTCCAGGAG TAACTGGATCAGGAGCCATTAAATCAAAGGGAATGACCACTTTTGACAAAGACGTCAATATTCTATTTCAGAAAAACAGT TCCTCAACAGCCGGGGGAGCTGTTAGTTGCAAGGGGATCGTATTAAAAGGAACTTCGGGAATCGCTAATTTTATAGAAAA TAAATCTTCAGAAAATGGCGGTGCAATAGAGTCTTCGGGAGAAAGCTTTATTGAAAACAATACTGGAGTTATTAGTTTCT TAGGAAATTCTTCTGCGAAACAGGGCGGAGCCATTCATTCGAGCAATAATATTACTGTGTCCAACAATAATAGTGTCGTG TTTTCTAAAAATACAACTACAGGAAACACAGACTCTTCTGGAGGAGCTATCTACTGTAAAGAAAGTAGCGGAAATACTGC AGAACTAAAGTTCGAAGGAAACAAACAACTAACTTTCTCAGAAAATGCATCCTCAACTAGTGGCGGAGCTATCTATGCGA ATAAGCTAACTATAAATTCTGGAGGCACCACAGTATTTTCTAATAACTCAACAAACTCAACAACCAATGCCACTCCTAAC GGGGGTGCTATTTGTTTAGATACAAGTGGAGAATGTAGTCTAACCGCAGATCTTGGTGATATCATCTTTGATGGGAATAA AATAATAACAAGTGGTGGCGCTTCCACAACAAGAAACGCCATAGATTTAAATACTTCCGGAAAATTTGCCAAGCTAAGTG CCAAAGAAGGTTTTGGTATCTACTTCTATGATCCTATTGCCAATAACGGAGACACTAGCACTGATCTACATATCAACCAA CAAGAAAACGCTGCTACTTATACAGGAAAAATTGTCTTTTCTGGGGAAACTTTATCTACCCAAGAAAAAACTCAAGAAGA AAACCTAACTTCAACGTTTAAACAACCGGTTACTCTATCAGCGGGATCTCTCATTCTTAAAGATGGTGTTACTGTAGAAG CCAAGTCCTTTACTCAAACTCCAGGATCCTCGGTTATTATGGATGTGGGCACCACTCTACGGACTCCGTCCAATGACGGT GAGGCTATTACATTGCCTGATCTGAGCATAAACATCGCCTCGTTGGGGGGGGGGGGGGTACTGTCTCCTGCTAAAATCCA ATCTCAAACAAATGACAAACTAATTAACGTTACAGCAATTAGTTACGTTAATGAAGGCGGAAATGCTTACGAATATCCCG TATTCTCTATAACTCGTGATTTCGCATCCGCTATAACTCTAGTTGCGGCTAACGGAACACAAGCAGCCCCAACTATTCCT GCCACTCCCTATACACCAGCTCAGCACTACGGCTATCAGGGAAATTGGTCTATCGCCTGGAAACAAGGTACTGGAGCCAA CCAACAGAATGCTACTTTAACTTGGACTCAAACCGGTTATCTTCCTAACCCAGAACGTGAAGCACCGTTGGTTCCGAACA CATTATGGGGAACATTTACAGATATTCGTGCCCTACACCAACTTATGGAAATAAGTGCTAAAGGTATAGAACACGAACGT GGCCTTTGGGGATCTGCGATCACAGACTTCCTACATAGGAAAAAAACAAATACGAGCAGGAAATACCGTCATATCGGCGT GGGTTATGCTGTAGGTGCTAGCGCACAGACACCAACAGAAGATTTATTTTCTTTAGCCTTTTGTCAGCTCTTTGATAGAG ATAAAGATTATATGATATCTAAAAACCGCACGCATGTCTATGCGGGCTCATTGTTCTTCGAACATTTTCATATGCTGCAT CCTCAGACTTACCTTACTCAAGCAAGAGCTAAAATTCCCTCTTCCTTTTTATCAAAGCTTCCTGAGAATGTTCCTGTGAT TTTCAACATCCTGTTTAGCTACAGCCATGCTGAAAATGATATGAAAACTCGTTACACCCAACGCTATGCGCCTAAGAATA TTATTTATCCTGAGGTTAAAGGCAGTTGGGCAACAAATTGCTTTGCTGGAGAAATTAGCGGTAGCCTCCCTATAGAGCTT TCGGACTCTTATGTCTTGGATAAATTTGTTCCTTTCCTGAAGGCACAGATGATCTATGGAGAACAAGAAAGCTTCCAAGA GCCAACAAGTGAAGGACGTGCTTTTGAAAGTAGCCATCTTTTGAACTTGTCTTTACCTATTGGTGTGAAGTTTGAAAGTG TATTTGGAAATGACCAAGATACTTTCGATCTTATGCTTGCATATTCTCCGGACGTTTTCCGCGTGAATCCACATTGTACA ACTTCATTAGTTGTTACAGGAGCTGCTTGGGAAACCAAAGCTGCACCTTTAGCTAGACATGCTTTAGTCGTTCGTGCTTC TAATAATTTTACCTATTCTGACTATGTAGAATTATTTGGACACGGTGGATTCGAACTTCGCGGATCTGCGTACGGCTATA ATTTTGATCTTGGTGGAAAAATCCGCTTCTAA
Upstream 100 bases:
>100_bases CCATCCCGGGGCAGGGCCTTTCATTCCCTTCAATCTCATTGACTTTTAATTATTTTTGTGATCGTCTTAAGCCATCTCAA ATCACCCAGAGCATGAACAT
Downstream 100 bases:
>100_bases GATTTCTTCTCTCTTCCCCGCCTAGTTCCAAGCGGGGAAGATCCTCCGCATTTCCTACATCACTGCATAGCAACTCTTGC TTTATTTTCCTCTTTCCCCT
Product: polymorphic outer membrane protein G/9 family protein
Products: NA
Alternate protein names: Outer membrane protein 5; Polymorphic membrane protein 10 [H]
Number of amino acids: Translated: 943; Mature: 943
Protein sequence:
>943_residues MKHPIYWFLVSSGLLASTSLSLATPVEVTLPSTDSYNGNNSASTPFTPKDTSDSTGTQYNCTGDVCIANADTNSKSCFSQ SVGDLSFMGNGYSLCFESITATGKPGAIETTASDKNVSISNFSMFNCSFCPPGVTGSGAIKSKGMTTFDKDVNILFQKNS SSTAGGAVSCKGIVLKGTSGIANFIENKSSENGGAIESSGESFIENNTGVISFLGNSSAKQGGAIHSSNNITVSNNNSVV FSKNTTTGNTDSSGGAIYCKESSGNTAELKFEGNKQLTFSENASSTSGGAIYANKLTINSGGTTVFSNNSTNSTTNATPN GGAICLDTSGECSLTADLGDIIFDGNKIITSGGASTTRNAIDLNTSGKFAKLSAKEGFGIYFYDPIANNGDTSTDLHINQ QENAATYTGKIVFSGETLSTQEKTQEENLTSTFKQPVTLSAGSLILKDGVTVEAKSFTQTPGSSVIMDVGTTLRTPSNDG EAITLPDLSINIASLGGGGVLSPAKIQSQTNDKLINVTAISYVNEGGNAYEYPVFSITRDFASAITLVAANGTQAAPTIP ATPYTPAQHYGYQGNWSIAWKQGTGANQQNATLTWTQTGYLPNPEREAPLVPNTLWGTFTDIRALHQLMEISAKGIEHER GLWGSAITDFLHRKKTNTSRKYRHIGVGYAVGASAQTPTEDLFSLAFCQLFDRDKDYMISKNRTHVYAGSLFFEHFHMLH PQTYLTQARAKIPSSFLSKLPENVPVIFNILFSYSHAENDMKTRYTQRYAPKNIIYPEVKGSWATNCFAGEISGSLPIEL SDSYVLDKFVPFLKAQMIYGEQESFQEPTSEGRAFESSHLLNLSLPIGVKFESVFGNDQDTFDLMLAYSPDVFRVNPHCT TSLVVTGAAWETKAAPLARHALVVRASNNFTYSDYVELFGHGGFELRGSAYGYNFDLGGKIRF
Sequences:
>Translated_943_residues MKHPIYWFLVSSGLLASTSLSLATPVEVTLPSTDSYNGNNSASTPFTPKDTSDSTGTQYNCTGDVCIANADTNSKSCFSQ SVGDLSFMGNGYSLCFESITATGKPGAIETTASDKNVSISNFSMFNCSFCPPGVTGSGAIKSKGMTTFDKDVNILFQKNS SSTAGGAVSCKGIVLKGTSGIANFIENKSSENGGAIESSGESFIENNTGVISFLGNSSAKQGGAIHSSNNITVSNNNSVV FSKNTTTGNTDSSGGAIYCKESSGNTAELKFEGNKQLTFSENASSTSGGAIYANKLTINSGGTTVFSNNSTNSTTNATPN GGAICLDTSGECSLTADLGDIIFDGNKIITSGGASTTRNAIDLNTSGKFAKLSAKEGFGIYFYDPIANNGDTSTDLHINQ QENAATYTGKIVFSGETLSTQEKTQEENLTSTFKQPVTLSAGSLILKDGVTVEAKSFTQTPGSSVIMDVGTTLRTPSNDG EAITLPDLSINIASLGGGGVLSPAKIQSQTNDKLINVTAISYVNEGGNAYEYPVFSITRDFASAITLVAANGTQAAPTIP ATPYTPAQHYGYQGNWSIAWKQGTGANQQNATLTWTQTGYLPNPEREAPLVPNTLWGTFTDIRALHQLMEISAKGIEHER GLWGSAITDFLHRKKTNTSRKYRHIGVGYAVGASAQTPTEDLFSLAFCQLFDRDKDYMISKNRTHVYAGSLFFEHFHMLH PQTYLTQARAKIPSSFLSKLPENVPVIFNILFSYSHAENDMKTRYTQRYAPKNIIYPEVKGSWATNCFAGEISGSLPIEL SDSYVLDKFVPFLKAQMIYGEQESFQEPTSEGRAFESSHLLNLSLPIGVKFESVFGNDQDTFDLMLAYSPDVFRVNPHCT TSLVVTGAAWETKAAPLARHALVVRASNNFTYSDYVELFGHGGFELRGSAYGYNFDLGGKIRF >Mature_943_residues MKHPIYWFLVSSGLLASTSLSLATPVEVTLPSTDSYNGNNSASTPFTPKDTSDSTGTQYNCTGDVCIANADTNSKSCFSQ SVGDLSFMGNGYSLCFESITATGKPGAIETTASDKNVSISNFSMFNCSFCPPGVTGSGAIKSKGMTTFDKDVNILFQKNS SSTAGGAVSCKGIVLKGTSGIANFIENKSSENGGAIESSGESFIENNTGVISFLGNSSAKQGGAIHSSNNITVSNNNSVV FSKNTTTGNTDSSGGAIYCKESSGNTAELKFEGNKQLTFSENASSTSGGAIYANKLTINSGGTTVFSNNSTNSTTNATPN GGAICLDTSGECSLTADLGDIIFDGNKIITSGGASTTRNAIDLNTSGKFAKLSAKEGFGIYFYDPIANNGDTSTDLHINQ QENAATYTGKIVFSGETLSTQEKTQEENLTSTFKQPVTLSAGSLILKDGVTVEAKSFTQTPGSSVIMDVGTTLRTPSNDG EAITLPDLSINIASLGGGGVLSPAKIQSQTNDKLINVTAISYVNEGGNAYEYPVFSITRDFASAITLVAANGTQAAPTIP ATPYTPAQHYGYQGNWSIAWKQGTGANQQNATLTWTQTGYLPNPEREAPLVPNTLWGTFTDIRALHQLMEISAKGIEHER GLWGSAITDFLHRKKTNTSRKYRHIGVGYAVGASAQTPTEDLFSLAFCQLFDRDKDYMISKNRTHVYAGSLFFEHFHMLH PQTYLTQARAKIPSSFLSKLPENVPVIFNILFSYSHAENDMKTRYTQRYAPKNIIYPEVKGSWATNCFAGEISGSLPIEL SDSYVLDKFVPFLKAQMIYGEQESFQEPTSEGRAFESSHLLNLSLPIGVKFESVFGNDQDTFDLMLAYSPDVFRVNPHCT TSLVVTGAAWETKAAPLARHALVVRASNNFTYSDYVELFGHGGFELRGSAYGYNFDLGGKIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR003368 - InterPro: IPR006315 - InterPro: IPR006626 - InterPro: IPR011427 [H]
Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]
EC number: NA
Molecular weight: Translated: 100832; Mature: 100832
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPIYWFLVSSGLLASTSLSLATPVEVTLPSTDSYNGNNSASTPFTPKDTSDSTGTQYN CCCCEEEEEECCCCEEECCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE CTGDVCIANADTNSKSCFSQSVGDLSFMGNGYSLCFESITATGKPGAIETTASDKNVSIS CCCCEEEEECCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEE NFSMFNCSFCPPGVTGSGAIKSKGMTTFDKDVNILFQKNSSSTAGGAVSCKGIVLKGTSG EEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEEEEEECCCH IANFIENKSSENGGAIESSGESFIENNTGVISFLGNSSAKQGGAIHSSNNITVSNNNSVV HHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCEEE FSKNTTTGNTDSSGGAIYCKESSGNTAELKFEGNKQLTFSENASSTSGGAIYANKLTINS EECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEECC GGTTVFSNNSTNSTTNATPNGGAICLDTSGECSLTADLGDIIFDGNKIITSGGASTTRNA CCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCEEEECCCCCCCCCE IDLNTSGKFAKLSAKEGFGIYFYDPIANNGDTSTDLHINQQENAATYTGKIVFSGETLST EEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCC QEKTQEENLTSTFKQPVTLSAGSLILKDGVTVEAKSFTQTPGSSVIMDVGTTLRTPSNDG HHHHHHHHHHHHHCCCEEECCCCEEEECCCEEEECCCCCCCCCEEEEECCCEECCCCCCC EAITLPDLSINIASLGGGGVLSPAKIQSQTNDKLINVTAISYVNEGGNAYEYPVFSITRD CEEEECCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCEEECCHHHHHHH FASAITLVAANGTQAAPTIPATPYTPAQHYGYQGNWSIAWKQGTGANQQNATLTWTQTGY HHCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCC LPNPEREAPLVPNTLWGTFTDIRALHQLMEISAKGIEHERGLWGSAITDFLHRKKTNTSR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCC KYRHIGVGYAVGASAQTPTEDLFSLAFCQLFDRDKDYMISKNRTHVYAGSLFFEHFHMLH CEEEEECEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHC PQTYLTQARAKIPSSFLSKLPENVPVIFNILFSYSHAENDMKTRYTQRYAPKNIIYPEVK CHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCCCC GSWATNCFAGEISGSLPIELSDSYVLDKFVPFLKAQMIYGEQESFQEPTSEGRAFESSHL CCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCEECCCEE LNLSLPIGVKFESVFGNDQDTFDLMLAYSPDVFRVNPHCTTSLVVTGAAWETKAAPLARH EEEECCCCEEEHHHCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCEEE ALVVRASNNFTYSDYVELFGHGGFELRGSAYGYNFDLGGKIRF EEEEEECCCCCHHHHHHHHCCCCEEEECCEEEEEECCCCEECC >Mature Secondary Structure MKHPIYWFLVSSGLLASTSLSLATPVEVTLPSTDSYNGNNSASTPFTPKDTSDSTGTQYN CCCCEEEEEECCCCEEECCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE CTGDVCIANADTNSKSCFSQSVGDLSFMGNGYSLCFESITATGKPGAIETTASDKNVSIS CCCCEEEEECCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEE NFSMFNCSFCPPGVTGSGAIKSKGMTTFDKDVNILFQKNSSSTAGGAVSCKGIVLKGTSG EEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEEEEEECCCH IANFIENKSSENGGAIESSGESFIENNTGVISFLGNSSAKQGGAIHSSNNITVSNNNSVV HHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCEEE FSKNTTTGNTDSSGGAIYCKESSGNTAELKFEGNKQLTFSENASSTSGGAIYANKLTINS EECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEECC GGTTVFSNNSTNSTTNATPNGGAICLDTSGECSLTADLGDIIFDGNKIITSGGASTTRNA CCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCEEEECCCCCCCCCE IDLNTSGKFAKLSAKEGFGIYFYDPIANNGDTSTDLHINQQENAATYTGKIVFSGETLST EEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCC QEKTQEENLTSTFKQPVTLSAGSLILKDGVTVEAKSFTQTPGSSVIMDVGTTLRTPSNDG HHHHHHHHHHHHHCCCEEECCCCEEEECCCEEEECCCCCCCCCEEEEECCCEECCCCCCC EAITLPDLSINIASLGGGGVLSPAKIQSQTNDKLINVTAISYVNEGGNAYEYPVFSITRD CEEEECCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCEEECCHHHHHHH FASAITLVAANGTQAAPTIPATPYTPAQHYGYQGNWSIAWKQGTGANQQNATLTWTQTGY HHCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCC LPNPEREAPLVPNTLWGTFTDIRALHQLMEISAKGIEHERGLWGSAITDFLHRKKTNTSR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCC KYRHIGVGYAVGASAQTPTEDLFSLAFCQLFDRDKDYMISKNRTHVYAGSLFFEHFHMLH CEEEEECEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHC PQTYLTQARAKIPSSFLSKLPENVPVIFNILFSYSHAENDMKTRYTQRYAPKNIIYPEVK CHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCCCC GSWATNCFAGEISGSLPIELSDSYVLDKFVPFLKAQMIYGEQESFQEPTSEGRAFESSHL CCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCEECCCEE LNLSLPIGVKFESVFGNDQDTFDLMLAYSPDVFRVNPHCTTSLVVTGAAWETKAAPLARH EEEECCCCEEEHHHCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCEEE ALVVRASNNFTYSDYVELFGHGGFELRGSAYGYNFDLGGKIRF EEEEEECCCCCHHHHHHHHCCCCEEEECCEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10539856; 10684935; 10871362; 9864239 [H]