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The map label for this gene is rbfA [H]

Identifier: 89898350

GI number: 89898350

Start: 639998

End: 640360

Strand: Direct

Name: rbfA [H]

Synonym: CF0543

Alternate gene names: 89898350

Gene position: 639998-640360 (Clockwise)

Preceding gene: 89898349

Following gene: 89898351

Centisome position: 54.88

GC content: 34.99

Gene sequence:

>363_bases
ATGGCAGAAAACAGACGCATACAAAAAGTTAATTCACTAATTCGTGAAGCGATTGCTAATGTGATCTTAAAAGATGTAAA
ACATCCTAAAATTTCCAATCGTTGGATTACGGTTACTAGGGTATGTTTATCTAAAGACTTACATACCGCACGTGTCTATG
TTTCGATTATGCCTCACGAAAACACCTCTGCAGAAACTTTAAAAGCATTGAAAGCGTCCGCAGGATTTATTGCTTATAGG
GCTTCTAAAGGTGTTTTTCTTAAGTATTTTCCTGAGATAAGTTTTTACCTCGAAGACATTTTTTCTCCACAGGATCATAT
AGAAAACTTGCTTTGGAAAATACGCGAGCAAGATAAAAATTAA

Upstream 100 bases:

>100_bases
TGAATGTGGTATTTTATTAGAAGGATATCAGAATGCTCAAGTAGGTGATATTCTACAGTGTTATGAAGTGATTTATCATC
CACAAAAGCTTTAAAGGATT

Downstream 100 bases:

>100_bases
TTCATCTGCCTAGAAAGATCTAACATTAACGACATCATTATGGAACTTGCTACAGAACTTAAAGAAGGAATTCTTCTAGT
AGATAAGCCTCAGGGTAGAA

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAENRRIQKVNSLIREAIANVILKDVKHPKISNRWITVTRVCLSKDLHTARVYVSIMPHENTSAETLKALKASAGFIAYR
ASKGVFLKYFPEISFYLEDIFSPQDHIENLLWKIREQDKN

Sequences:

>Translated_120_residues
MAENRRIQKVNSLIREAIANVILKDVKHPKISNRWITVTRVCLSKDLHTARVYVSIMPHENTSAETLKALKASAGFIAYR
ASKGVFLKYFPEISFYLEDIFSPQDHIENLLWKIREQDKN
>Mature_119_residues
AENRRIQKVNSLIREAIANVILKDVKHPKISNRWITVTRVCLSKDLHTARVYVSIMPHENTSAETLKALKASAGFIAYRA
SKGVFLKYFPEISFYLEDIFSPQDHIENLLWKIREQDKN

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 13929; Mature: 13798

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENRRIQKVNSLIREAIANVILKDVKHPKISNRWITVTRVCLSKDLHTARVYVSIMPHE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
NTSAETLKALKASAGFIAYRASKGVFLKYFPEISFYLEDIFSPQDHIENLLWKIREQDKN
CCHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AENRRIQKVNSLIREAIANVILKDVKHPKISNRWITVTRVCLSKDLHTARVYVSIMPHE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
NTSAETLKALKASAGFIAYRASKGVFLKYFPEISFYLEDIFSPQDHIENLLWKIREQDKN
CCHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA