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The map label for this gene is omp07

Identifier: 89898333

GI number: 89898333

Start: 618133

End: 618672

Strand: Direct

Name: omp07

Synonym: CF0526

Alternate gene names: NA

Gene position: 618133-618672 (Clockwise)

Preceding gene: 89898332

Following gene: 89898334

Centisome position: 53.0

GC content: 33.52

Gene sequence:

>540_bases
ATGAAAAAATCATTACGCCCTGTCTTTCTAGCTTTTTTAACTTTAGCGGGTACGCAGCAAGCTTTTGCAGATGACGACCA
TCTTAAGGGTGGTTTAGGTGTTGTTAGCTTAAAACGCTGCTTAGAAGAATCTGCTTTTGGGAAAAAAGAAACAGAAGAAC
TCGAAAACATGAAAGAACAGTTCTCAAAAAATTCCGAAAAAATGGAAGAAGAACTGTCAGCACTTTATAATAAGCTACAA
GACGAAGATTACATGGAGAGTCTCTCCACTTCAGCTTCAGATGAACTAAGAAAGAAATTCGAAAATCTTTCTTCAGAATA
TAATGCTTTGCAGTCTCAATATTATCAGATGTTGAATCAAAGCAATATGAAAAGAGTTCAAAAGCTCATAAAAGAAGTAA
AAAAAGCTTCTAATATAGTACGAGAACAAACAGGTTTAGCAGCAGTCTTGAATGATGAAGTGGTTCTCTCTATTGATTCT
AGCGCTGATATAACTAATGAAATTATCAAAATTCTTGATGAATCTTTCAAAAATAATTAA

Upstream 100 bases:

>100_bases
TGGGAAAGAAAGTAAGCGAAGCTCTAAATCTTTGGTTGTCTTCAGAGAGGGCTTTTGCTAATCTAAAGTTCTTCATCTCT
TAGATCTTATAAAGGTTAAT

Downstream 100 bases:

>100_bases
GATACCTCAAGAACCAAGGAGTTTTGTATGCCTCAAGAACTGGTCTATACTCTTCAACAGTTAGCAGACTTATTAAAAGT
TGAAGTTCAAGGAAATACAG

Product: outer membrane protein/ompH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKKSLRPVFLAFLTLAGTQQAFADDDHLKGGLGVVSLKRCLEESAFGKKETEELENMKEQFSKNSEKMEEELSALYNKLQ
DEDYMESLSTSASDELRKKFENLSSEYNALQSQYYQMLNQSNMKRVQKLIKEVKKASNIVREQTGLAAVLNDEVVLSIDS
SADITNEIIKILDESFKNN

Sequences:

>Translated_179_residues
MKKSLRPVFLAFLTLAGTQQAFADDDHLKGGLGVVSLKRCLEESAFGKKETEELENMKEQFSKNSEKMEEELSALYNKLQ
DEDYMESLSTSASDELRKKFENLSSEYNALQSQYYQMLNQSNMKRVQKLIKEVKKASNIVREQTGLAAVLNDEVVLSIDS
SADITNEIIKILDESFKNN
>Mature_179_residues
MKKSLRPVFLAFLTLAGTQQAFADDDHLKGGLGVVSLKRCLEESAFGKKETEELENMKEQFSKNSEKMEEELSALYNKLQ
DEDYMESLSTSASDELRKKFENLSSEYNALQSQYYQMLNQSNMKRVQKLIKEVKKASNIVREQTGLAAVLNDEVVLSIDS
SADITNEIIKILDESFKNN

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 20348; Mature: 20348

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLRPVFLAFLTLAGTQQAFADDDHLKGGLGVVSLKRCLEESAFGKKETEELENMKEQ
CCCCHHHHHHHHHHHHCCHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FSKNSEKMEEELSALYNKLQDEDYMESLSTSASDELRKKFENLSSEYNALQSQYYQMLNQ
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNMKRVQKLIKEVKKASNIVREQTGLAAVLNDEVVLSIDSSADITNEIIKILDESFKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSLRPVFLAFLTLAGTQQAFADDDHLKGGLGVVSLKRCLEESAFGKKETEELENMKEQ
CCCCHHHHHHHHHHHHCCHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FSKNSEKMEEELSALYNKLQDEDYMESLSTSASDELRKKFENLSSEYNALQSQYYQMLNQ
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNMKRVQKLIKEVKKASNIVREQTGLAAVLNDEVVLSIDSSADITNEIIKILDESFKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]