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The map label for this gene is recR

Identifier: 89898331

GI number: 89898331

Start: 614869

End: 615471

Strand: Direct

Name: recR

Synonym: CF0524

Alternate gene names: 89898331

Gene position: 614869-615471 (Clockwise)

Preceding gene: 89898326

Following gene: 89898332

Centisome position: 52.72

GC content: 35.49

Gene sequence:

>603_bases
ATGTTAAAGTATCCAGATTATCTATCCAAATTAATCTCTTTTCTTAGGAAACTTCCAGGAATAGGATTTAAAACAGCCGA
AAAGTTGGCTTTTGAACTTTTAGACTGGGAGCAAGATCAATTAGAAGCATTGGGTAAAGCCTTTTCTGAATTATCTATAG
CACGTAGTCACTGTCCCTGTTGTTTTTGCTTAAAAAATTTTCCAGAAAGTCAGTGCGAATTTTGTCAAAACAACCGCGAC
ACTTCCACATTATGTATCGTAGCCAGTCCTAAAGACATTTTTTCTTTAGAACGTTCTCAAGTTTTTAAAGGTCATTACTA
TGTCCTGGGGACATTGCTATCACCTTTAACAGGAAAACATATTGAAGAAGAAAGAATGCGGTTATTAAAACAACGCATAG
AATTTTTAAACCCCAAAGAAATAATTCTAGCTCTGGATGCCACTTTGGAAGGAGATGCCACTGCTCTTTTTTTAAAACAA
GAGTTAGCCTATTCCCTAGCTTCTATTTCACGTTTGGCTTTAGGTTTGCCAATAGGATTGTCTTTTGATTATATAGACTC
TGGAACTCTTGCTAGAGCATTTTCTGGAAGAAATCCATATTAA

Upstream 100 bases:

>100_bases
TATACTATTCAAAGAGTTTATACCCTAACTTTTATTTTAGGTATTTAGGCTCCTTCTGCAACTCTACAGCATAACAAAAA
AAATATAGATAAGTTCTAAA

Downstream 100 bases:

>100_bases
ACTTGAAATAAATTTTTTCTATTTTTAATTTTTTTGGGGTTGTAAAAATATAAGCAATCTCTAGAAGCTCTGTCTATGTT
CAAGATAGTAAGATCTTGTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLKYPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFCLKNFPESQCEFCQNNRD
TSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIEEERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQ
ELAYSLASISRLALGLPIGLSFDYIDSGTLARAFSGRNPY

Sequences:

>Translated_200_residues
MLKYPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFCLKNFPESQCEFCQNNRD
TSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIEEERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQ
ELAYSLASISRLALGLPIGLSFDYIDSGTLARAFSGRNPY
>Mature_200_residues
MLKYPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPCCFCLKNFPESQCEFCQNNRD
TSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKHIEEERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQ
ELAYSLASISRLALGLPIGLSFDYIDSGTLARAFSGRNPY

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=198, Percent_Identity=35.3535353535354, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CHLFF (Q254J2)

Other databases:

- EMBL:   AP006861
- RefSeq:   YP_515441.1
- ProteinModelPortal:   Q254J2
- SMR:   Q254J2
- STRING:   Q254J2
- GeneID:   3958902
- GenomeReviews:   AP006861_GR
- KEGG:   cfe:CF0524
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   CFEL264202:CF0524-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22570; Mature: 22570

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPC
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
CFCLKNFPESQCEFCQNNRDTSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKH
HHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
IEEERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQELAYSLASISRLALGLPIGL
CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SFDYIDSGTLARAFSGRNPY
EECCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MLKYPDYLSKLISFLRKLPGIGFKTAEKLAFELLDWEQDQLEALGKAFSELSIARSHCPC
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
CFCLKNFPESQCEFCQNNRDTSTLCIVASPKDIFSLERSQVFKGHYYVLGTLLSPLTGKH
HHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
IEEERMRLLKQRIEFLNPKEIILALDATLEGDATALFLKQELAYSLASISRLALGLPIGL
CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SFDYIDSGTLARAFSGRNPY
EECCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA