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The map label for this gene is rbn

Identifier: 89898267

GI number: 89898267

Start: 544730

End: 546022

Strand: Direct

Name: rbn

Synonym: CF0460

Alternate gene names: NA

Gene position: 544730-546022 (Clockwise)

Preceding gene: 89898266

Following gene: 89898268

Centisome position: 46.71

GC content: 35.73

Gene sequence:

>1293_bases
ATGTTTCGGAAGTTCTCACTATTTTCTAAAAAAAAAAAGAATCCAAAGTTGGGATTTCGAAATAGTCGAATCGTTAGATC
TTTCTTACTTGCCCCCAAGGTTTTATTGAGAAATGAGGTTTCTAAAGAGGCCTGTGTTTTGAGTTATTACGGTTTGTTTA
GCTGCATACCGATACTCGTCTTTTTTTTAAGGCTATCCCAGCATCTTTTTGTAAATTTAGATTGGAAAGAGTGGCTGCTT
GTTAAGTTCCCTGATTATAAAGGACCTATCTTAGCGATTGTTGAAGCTGCTTACCGTTCTACAACGAGTAATATCGGCTT
GGTATTGGTAGGAAGTTTCTTTGTTTTTTGCTGGGCTGGGATTCTTATGCTTTTATCCTTAGAAGATGGTTTGAATAAGA
TCTTCAGAACTGGATGGACCCCAATATCTATTCAGAGATTGGTTTCTTATTTGATCATTACGTTAGTAAGCCCAATGATT
TTTATTATTGTGTGCGGCTCATGGATTTATATCACCCAAATTATGCCAGTGCAGTATGCACGTCTATTTTCTCTAAGCCA
TTCCATTACAGCATTGTACGTATTTTCAAGACTGACGCCCTATTTATTCATCTATTTGGCTTTATTTTGCTTTTATGCAT
TTTTACCTAGAGTTTCTGTGCAAAAGACAGCAGCGTTTATCTCAGCTTTAACGGCAGGAACACTGTGGATAATTTTTCAG
AAGGTTTTCTTCTGCTTACAGTTTTACCTATTTAACTATAGTTTTACTTACGGAGCTTTAGTGGCTCTGCCTTCGTTTTT
GCTGCTTCTTTATCTCTATGCAATGATTTATCTTTTTGGAGGGGCTTTTACTTTTCTTATTCAAAATCAAGGATGTAACT
TTGTTTTGCCTGCAGAACAGTACTTGACCAATTGCTATATAAAGCTTGTAGTATGCACTTATATTCTTTCTGTGGTATCG
AGAGATTTTAATCAGGCCTCCACACCACCTACCGCAAAGACCATAGCTAAAAATTCTAAAATCCCTATTGGAGAGATCTC
CCAGTGTTTAGATATTTTAGAAAATGAAGGCTTCATTCTTTCTTATAAGAGAGCTTACAAGCCAACTTATAACATTTCAG
GACTCACTATTAAAGATATAGTCGAGCAACTACTCCATTTAAAAACTTTCAGTCAAGTTCATCCAGACGCAGCCTTAAGT
TTAATACAAAGTTGTTTGAAAGACATGTTTAATCAAGCAACAAAAAGCTCTTATAACCTAACTCTTACAGATATTGCCGG
AAAGATAAAATGA

Upstream 100 bases:

>100_bases
TGTATTAAGATTAATAATATTTAATAAAATAAAGTTTATAAAACTTGGCGTCAAAAAGCATTTTTTTATTAAAATAAGTA
AAAACGCTTTTTGATTTAAT

Downstream 100 bases:

>100_bases
AACGAAGATCCTGGTATAAGACTCTAGGGATAAGTATAAGTTTAGGAGTTTTCCTGACTTTTGTTTATTTTCTGCCTCCG
CTACTTTCTCAAGGATCCGG

Product: tRNA-processing ribonuclease BN

Products: NA

Alternate protein names: TRNA-Processing Ribonuclease BN; Ribonuclease Bn; Ribonuclease BN Family Membrane Protein; tRNA Processing Ribonuclease; tRNA Processing Ribonuclease Rbn; Ribonuclease BN Family Protein; Inner Membrane Protein

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MFRKFSLFSKKKKNPKLGFRNSRIVRSFLLAPKVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFVNLDWKEWLL
VKFPDYKGPILAIVEAAYRSTTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPISIQRLVSYLIITLVSPMI
FIIVCGSWIYITQIMPVQYARLFSLSHSITALYVFSRLTPYLFIYLALFCFYAFLPRVSVQKTAAFISALTAGTLWIIFQ
KVFFCLQFYLFNYSFTYGALVALPSFLLLLYLYAMIYLFGGAFTFLIQNQGCNFVLPAEQYLTNCYIKLVVCTYILSVVS
RDFNQASTPPTAKTIAKNSKIPIGEISQCLDILENEGFILSYKRAYKPTYNISGLTIKDIVEQLLHLKTFSQVHPDAALS
LIQSCLKDMFNQATKSSYNLTLTDIAGKIK

Sequences:

>Translated_430_residues
MFRKFSLFSKKKKNPKLGFRNSRIVRSFLLAPKVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFVNLDWKEWLL
VKFPDYKGPILAIVEAAYRSTTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPISIQRLVSYLIITLVSPMI
FIIVCGSWIYITQIMPVQYARLFSLSHSITALYVFSRLTPYLFIYLALFCFYAFLPRVSVQKTAAFISALTAGTLWIIFQ
KVFFCLQFYLFNYSFTYGALVALPSFLLLLYLYAMIYLFGGAFTFLIQNQGCNFVLPAEQYLTNCYIKLVVCTYILSVVS
RDFNQASTPPTAKTIAKNSKIPIGEISQCLDILENEGFILSYKRAYKPTYNISGLTIKDIVEQLLHLKTFSQVHPDAALS
LIQSCLKDMFNQATKSSYNLTLTDIAGKIK
>Mature_430_residues
MFRKFSLFSKKKKNPKLGFRNSRIVRSFLLAPKVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFVNLDWKEWLL
VKFPDYKGPILAIVEAAYRSTTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPISIQRLVSYLIITLVSPMI
FIIVCGSWIYITQIMPVQYARLFSLSHSITALYVFSRLTPYLFIYLALFCFYAFLPRVSVQKTAAFISALTAGTLWIIFQ
KVFFCLQFYLFNYSFTYGALVALPSFLLLLYLYAMIYLFGGAFTFLIQNQGCNFVLPAEQYLTNCYIKLVVCTYILSVVS
RDFNQASTPPTAKTIAKNSKIPIGEISQCLDILENEGFILSYKRAYKPTYNISGLTIKDIVEQLLHLKTFSQVHPDAALS
LIQSCLKDMFNQATKSSYNLTLTDIAGKIK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49067; Mature: 49067

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCCCCC
>Mature Secondary Structure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EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA