Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 89257031

GI number: 89257031

Start: 1695821

End: 1697248

Strand: Direct

Name: qseC [H]

Synonym: FTL_1762

Alternate gene names: 89257031

Gene position: 1695821-1697248 (Clockwise)

Preceding gene: 89257026

Following gene: 89257033

Centisome position: 89.44

GC content: 31.79

Gene sequence:

>1428_bases
ATGTTTTTGAAAAACAAAAAAGAAAGCTCGATACTAAGTTTTCTTGTCGTTTCTTTTGCAAGCTTTTTTGCAGTGTTTAT
GTTGGTTATATCAATTTTTAGTTTCTATCAAGTTAAGCATCAAAATGATTCGCTCCTTGACTATCAGCTAAGAACTGCTG
CGGAAGTTATCGAAACTGTACTGAAAATTTATCCTTTAGAAGATGATGAAAATACTACTCATATGATAATGAATAGAATC
TCGAATTCTTTTTTAAATATAAAAAACTACAATAAGAGTATCGGCTTTATTGTATACGATCGAAAGCACAAAAAGCTGTT
ATTAAAGACATCTAATTTACCAAACTTTCACAAAAACTATGATGGCATAACATCTACAACAGGATTTGAATGGGTATACA
CTAACGAAGAGGATGGTCAGAAAAACTGGTATACCTATACTTTAAAAACTGATAATGGTAATCTTATCACGGTTTTTGCT
AACGATACTATTAAAGACAAAATATCTCGCCAAATAATATTTAAATTTGCGCTACTTTTAGCATCAACCTATATTGTGCT
TATTGGATTTATCTACTATATCTTAAAAACTGCTCTTCATCCACTAGAGCGTATAAACAAACGCGTTGCTAAAATAAATC
CTCGTAAAAATGAAAAGCTCAATGAAGATGTTATACCTTATGAAATAAAATCTATTGTTGATCAAATTAATTTACTTATT
GAAAAGTTCCACGAAACTCTCGAGAGAGAAAAGCGTTTCTCTGGTGATGCAGCCCATGAGCTTAAAACCCCAATAGCTGG
AGTTAAAACACTTGTAGAAATAGCTCTAGCATCAGACGATATAGATGAAATCAAACAAAAGCTTGAACGGATCAAAAGCT
CAACAAACAGATATTCTCATATTATTGATCAATTATTAACATTAAGTAGGATTCAACCCAATGAACAAGTTACATTCGGT
AAGAAACTTATGATAAATAAGGTTCTTGAATCCTTTATTGCCGAGAATGCTATCAAAGCTATAGAGAAAAATATTGAAAT
AGTATTTTATCCATCGCAACAACATTTATACTGTTACAGCAATGACTACCTACTTGGGATACTATTTAAAAATCTGATTT
CAAATGCTATCAAATATACCCCAAACGGCGGACTTATTGAGATTAGCTCATATCAAGAGGAAAACAATATAGTCGTCGAG
ATAAAAGATAATGGTATTGGCGTACCTCAAGAGAATATCGAACGTATTTTTGATAGATTTTATCGTGAAACAGGCACAGG
TGAAGAAGGTAGTGGACTAGGTTTAGCAATCGTCGCAGAAATCGTTAGGCTTCATAATGGTAAAATTTTTGCTCAAAACA
ATACCAACCAAAAAGGCTTAACCATTACTGTCAAAATTCCTATAGATCATAAATACGAAGAAAATTAA

Upstream 100 bases:

>100_bases
TAATTTATAACAATTATGTTTGATTATAAAAATTATAAAACTAATAATAAAATTCAAAATTGATTATAATTAAGCCAAAT
AAAATTATTTTAGTTAAAAT

Downstream 100 bases:

>100_bases
ATATATCGTTCTAAAGCTTGCTGTATATTTGAATCTTCAAAAACAAATCCTAATCTTTGTAATTTTGCTGGTTTAATATT
TTGACTTGACAGAAGTAACT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MFLKNKKESSILSFLVVSFASFFAVFMLVISIFSFYQVKHQNDSLLDYQLRTAAEVIETVLKIYPLEDDENTTHMIMNRI
SNSFLNIKNYNKSIGFIVYDRKHKKLLLKTSNLPNFHKNYDGITSTTGFEWVYTNEEDGQKNWYTYTLKTDNGNLITVFA
NDTIKDKISRQIIFKFALLLASTYIVLIGFIYYILKTALHPLERINKRVAKINPRKNEKLNEDVIPYEIKSIVDQINLLI
EKFHETLEREKRFSGDAAHELKTPIAGVKTLVEIALASDDIDEIKQKLERIKSSTNRYSHIIDQLLTLSRIQPNEQVTFG
KKLMINKVLESFIAENAIKAIEKNIEIVFYPSQQHLYCYSNDYLLGILFKNLISNAIKYTPNGGLIEISSYQEENNIVVE
IKDNGIGVPQENIERIFDRFYRETGTGEEGSGLGLAIVAEIVRLHNGKIFAQNNTNQKGLTITVKIPIDHKYEEN

Sequences:

>Translated_475_residues
MFLKNKKESSILSFLVVSFASFFAVFMLVISIFSFYQVKHQNDSLLDYQLRTAAEVIETVLKIYPLEDDENTTHMIMNRI
SNSFLNIKNYNKSIGFIVYDRKHKKLLLKTSNLPNFHKNYDGITSTTGFEWVYTNEEDGQKNWYTYTLKTDNGNLITVFA
NDTIKDKISRQIIFKFALLLASTYIVLIGFIYYILKTALHPLERINKRVAKINPRKNEKLNEDVIPYEIKSIVDQINLLI
EKFHETLEREKRFSGDAAHELKTPIAGVKTLVEIALASDDIDEIKQKLERIKSSTNRYSHIIDQLLTLSRIQPNEQVTFG
KKLMINKVLESFIAENAIKAIEKNIEIVFYPSQQHLYCYSNDYLLGILFKNLISNAIKYTPNGGLIEISSYQEENNIVVE
IKDNGIGVPQENIERIFDRFYRETGTGEEGSGLGLAIVAEIVRLHNGKIFAQNNTNQKGLTITVKIPIDHKYEEN
>Mature_475_residues
MFLKNKKESSILSFLVVSFASFFAVFMLVISIFSFYQVKHQNDSLLDYQLRTAAEVIETVLKIYPLEDDENTTHMIMNRI
SNSFLNIKNYNKSIGFIVYDRKHKKLLLKTSNLPNFHKNYDGITSTTGFEWVYTNEEDGQKNWYTYTLKTDNGNLITVFA
NDTIKDKISRQIIFKFALLLASTYIVLIGFIYYILKTALHPLERINKRVAKINPRKNEKLNEDVIPYEIKSIVDQINLLI
EKFHETLEREKRFSGDAAHELKTPIAGVKTLVEIALASDDIDEIKQKLERIKSSTNRYSHIIDQLLTLSRIQPNEQVTFG
KKLMINKVLESFIAENAIKAIEKNIEIVFYPSQQHLYCYSNDYLLGILFKNLISNAIKYTPNGGLIEISSYQEENNIVVE
IKDNGIGVPQENIERIFDRFYRETGTGEEGSGLGLAIVAEIVRLHNGKIFAQNNTNQKGLTITVKIPIDHKYEEN

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=286, Percent_Identity=32.1678321678322, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786783, Length=301, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790551, Length=316, Percent_Identity=26.2658227848101, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1790861, Length=288, Percent_Identity=23.9583333333333, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=25.7936507936508, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1790346, Length=269, Percent_Identity=27.5092936802974, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786600, Length=252, Percent_Identity=26.1904761904762, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788279, Length=285, Percent_Identity=26.3157894736842, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI48994928, Length=263, Percent_Identity=26.2357414448669, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=24.4, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787374, Length=306, Percent_Identity=26.4705882352941, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI145693157, Length=234, Percent_Identity=26.0683760683761, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1789808, Length=243, Percent_Identity=26.3374485596708, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1789149, Length=258, Percent_Identity=25.1937984496124, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=26.1802575107296, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=24.2152466367713, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788549, Length=216, Percent_Identity=24.537037037037, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54754; Mature: 54754

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKNKKESSILSFLVVSFASFFAVFMLVISIFSFYQVKHQNDSLLDYQLRTAAEVIETV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LKIYPLEDDENTTHMIMNRISNSFLNIKNYNKSIGFIVYDRKHKKLLLKTSNLPNFHKNY
HHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCC
DGITSTTGFEWVYTNEEDGQKNWYTYTLKTDNGNLITVFANDTIKDKISRQIIFKFALLL
CCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH
ASTYIVLIGFIYYILKTALHPLERINKRVAKINPRKNEKLNEDVIPYEIKSIVDQINLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EKFHETLEREKRFSGDAAHELKTPIAGVKTLVEIALASDDIDEIKQKLERIKSSTNRYSH
HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IIDQLLTLSRIQPNEQVTFGKKLMINKVLESFIAENAIKAIEKNIEIVFYPSQQHLYCYS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC
NDYLLGILFKNLISNAIKYTPNGGLIEISSYQEENNIVVEIKDNGIGVPQENIERIFDRF
CCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
YRETGTGEEGSGLGLAIVAEIVRLHNGKIFAQNNTNQKGLTITVKIPIDHKYEEN
HHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MFLKNKKESSILSFLVVSFASFFAVFMLVISIFSFYQVKHQNDSLLDYQLRTAAEVIETV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LKIYPLEDDENTTHMIMNRISNSFLNIKNYNKSIGFIVYDRKHKKLLLKTSNLPNFHKNY
HHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCC
DGITSTTGFEWVYTNEEDGQKNWYTYTLKTDNGNLITVFANDTIKDKISRQIIFKFALLL
CCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH
ASTYIVLIGFIYYILKTALHPLERINKRVAKINPRKNEKLNEDVIPYEIKSIVDQINLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EKFHETLEREKRFSGDAAHELKTPIAGVKTLVEIALASDDIDEIKQKLERIKSSTNRYSH
HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IIDQLLTLSRIQPNEQVTFGKKLMINKVLESFIAENAIKAIEKNIEIVFYPSQQHLYCYS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC
NDYLLGILFKNLISNAIKYTPNGGLIEISSYQEENNIVVEIKDNGIGVPQENIERIFDRF
CCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
YRETGTGEEGSGLGLAIVAEIVRLHNGKIFAQNNTNQKGLTITVKIPIDHKYEEN
HHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]