| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256858
Identifier: 89256858
GI number: 89256858
Start: 1507913
End: 1508728
Strand: Direct
Name: 89256858
Synonym: FTL_1581
Alternate gene names: NA
Gene position: 1507913-1508728 (Clockwise)
Preceding gene: 89256857
Following gene: 89256860
Centisome position: 79.53
GC content: 40.32
Gene sequence:
>816_bases ATGACTGCAAAAAAGAAACTATTAATAGGAACTGCAATTCTGTCTAGTGCAGCTATCTTAGGAAGTTGTGGCAAAAGTGA AACTGCTACAGAGCTACGTATAGTAGATCAATGCAATACTGCCAATGATCTATGTAAGTTTGAGCTAAATGATGCTTTAG TATCTCGTTATACTAATTTATTAGGTAAGACGATAGAGAGAATCGAAAGCCAAACTCCACTACAAGCTATCCAAGGAACA ATTACATGGAATCCACCAGCTGGTGCTACACTAGCGACTAATACAGATGTAGTGACTCAGCTTGGTTCAGGTTGTCAGAA TGATAGCTGTACTGCAAATGCCAACCCCACAGCATTTAATTTACAAGTTGGTAGTAACTCTATAAGTGTATCAGGTACTA TCACTGTTAATGGTAAAACAGTTGATTTAGCTTCTACTGTCCCACCAGTAACTGTGGATACAATCCAAGTTGCTGATAGT CATGTGTTCCAATCCGGAACTCTTCCAGCTGGTCTCACGATAGGAGATTTAGTCACCAACCTTAATATAAACGCTAGAGA TGCGCATGGAACATTCTCAGAACAAAATGGCACTCTCAAAATAACGTGCGAAACAGGTTGTGAGTGGATAGACGACCAAG ATCCTCCTTTCGGAAGTTTTACAACAGCTTCGACTTCTCGCAGCGTGGCTATGTCGTCTTGGTTAAGAGAAACTAATTCC TGGATTAATGGTGCTCAACCGAATTTTAGTCTTACTCAGAATGGAGTTTCCAATACAGTCTCATATACTTGGATCGCTGG CTGTTGGCAAAAATAG
Upstream 100 bases:
>100_bases ATCTAATTTCCTACTTTTCAATTAAAATTTATTTTGCTATGCTGCTCACAATTTAAGCTTATAGATATAAAATTTAAGTA ATATTAAGGAAATACCAGAA
Downstream 100 bases:
>100_bases TCCAGTAGAGGCCATCACATGATTATATCTATACAGATTTTATACTAATTTATAAATCCTTTTTGATTGTGTATAAACTT CTTTTTAATTCAAATAGGTG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTAKKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELNDALVSRYTNLLGKTIERIESQTPLQAIQGT ITWNPPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFNLQVGSNSISVSGTITVNGKTVDLASTVPPVTVDTIQVADS HVFQSGTLPAGLTIGDLVTNLNINARDAHGTFSEQNGTLKITCETGCEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNS WINGAQPNFSLTQNGVSNTVSYTWIAGCWQK
Sequences:
>Translated_271_residues MTAKKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELNDALVSRYTNLLGKTIERIESQTPLQAIQGT ITWNPPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFNLQVGSNSISVSGTITVNGKTVDLASTVPPVTVDTIQVADS HVFQSGTLPAGLTIGDLVTNLNINARDAHGTFSEQNGTLKITCETGCEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNS WINGAQPNFSLTQNGVSNTVSYTWIAGCWQK >Mature_270_residues TAKKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELNDALVSRYTNLLGKTIERIESQTPLQAIQGTI TWNPPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFNLQVGSNSISVSGTITVNGKTVDLASTVPPVTVDTIQVADSH VFQSGTLPAGLTIGDLVTNLNINARDAHGTFSEQNGTLKITCETGCEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNSW INGAQPNFSLTQNGVSNTVSYTWIAGCWQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28599; Mature: 28468
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELNDALVSRYTNL CCCCHHHEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHH LGKTIERIESQTPLQAIQGTITWNPPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFN HHHHHHHHHCCCCHHHHCEEEEECCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCEEE LQVGSNSISVSGTITVNGKTVDLASTVPPVTVDTIQVADSHVFQSGTLPAGLTIGDLVTN EEECCCEEEEEEEEEECCEEEECCCCCCCCEEEEEEECCCCEECCCCCCCCCCHHHHHHH LNINARDAHGTFSEQNGTLKITCETGCEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNS CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH WINGAQPNFSLTQNGVSNTVSYTWIAGCWQK HCCCCCCCCEEECCCCCCCEEEEEEECCCCC >Mature Secondary Structure TAKKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELNDALVSRYTNL CCCHHHEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHH LGKTIERIESQTPLQAIQGTITWNPPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFN HHHHHHHHHCCCCHHHHCEEEEECCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCEEE LQVGSNSISVSGTITVNGKTVDLASTVPPVTVDTIQVADSHVFQSGTLPAGLTIGDLVTN EEECCCEEEEEEEEEECCEEEECCCCCCCCEEEEEEECCCCEECCCCCCCCCCHHHHHHH LNINARDAHGTFSEQNGTLKITCETGCEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNS CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH WINGAQPNFSLTQNGVSNTVSYTWIAGCWQK HCCCCCCCCEEECCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA