| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is ydhK [C]
Identifier: 89256666
GI number: 89256666
Start: 1299242
End: 1300045
Strand: Direct
Name: ydhK [C]
Synonym: FTL_1367
Alternate gene names: 89256666
Gene position: 1299242-1300045 (Clockwise)
Preceding gene: 89256665
Following gene: 89256667
Centisome position: 68.53
GC content: 29.98
Gene sequence:
>804_bases ATGATAAAAGAATTGATAGATGATATACCTACGATCTTTAATACACAAAATGCTATACATACATTTAAGGCATGTATAGC TATTACTCTAGCACTTGGAATATCAATGAGTCTAGACTTAGACAAACCAATGTGGGCAATGATTGCAGCACTATTTCTAC AAACTCGTCCTGAAACTGGTTTTATAATAGAAAAAGCTTTGGTTCTAATCTGCGGATCAATTATTGGAGTAGGTGTTGGC TTTTTGATAGTAAATTTTTTCTTGCCTTATCCAGTACTAGCTTTATTAGCTTTATGTCTTTTTATAGCTGTAACAATGTT TTTCTCTGCTAATATGTCTCACCCAAACTTTATGTATGCATTAGCTATAGCAAATACAACTTGTAATATCGTTGTTTTTT ATGCTATTGCTGATCCTACATCCACTACAAGTGAAAGTGTTTTTCATACAGGATATTCTAGAGTTACAGAAATGGCAATT GGTAGCCTATGCTCATGTTTTGTAAACTATTATATTTTACCTTTTAAGGTTGAAAAAACTTTGAAAAACCATGCAACCCA AGGATTTGATTTAACAATAGCTTATATTAAAGAAATGTTCTCTACTCAAGACTTTAGCAATAATAAAAAATATAATCTAA AAGTCGAGAATATTCTTAATAATCTTGTTACTCTTGATAATGATTTAAGTGCTGCAAAATATGAAAATATAGCTAAAACA AACTATGCTGCCTTTTCAAATAAAGTAGTCGAACTAATCCAATCTGTTCATTTTTTGAGAAAAAATCTAGCAAAAAAAAG ATGA
Upstream 100 bases:
>100_bases GGGTAAGACTATCTAAGAGAATTCCTGTTGATATTGCTCTAGATAAAGTACCAATCAATACAGAACTTGTATCAGGAATG AATGCAACGGTAACTATAAA
Downstream 100 bases:
>100_bases TAAATACAGCTATCAAAAAAGATCTAGAAAACATAGTAACTAATCTAGACAAAATTGACTTAACTCAACACGCTTTAGTC AATGATTCAAATAACCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Fusaric Acid Resistance Protein Conserved Region; Fusaric Acid Resistance Protein; Efflux Transporter Permease Protein; Fusaric Acid Resistance Domain-Containing Protein; Fusaric Acid Resistance Domain Protein; Inner Membrane Efflux Transporter; Efflux Transporter Permease Subunit; FusB/FusC Fusaric Acid Resistance Pump; Multidrug Efflux Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIKELIDDIPTIFNTQNAIHTFKACIAITLALGISMSLDLDKPMWAMIAALFLQTRPETGFIIEKALVLICGSIIGVGVG FLIVNFFLPYPVLALLALCLFIAVTMFFSANMSHPNFMYALAIANTTCNIVVFYAIADPTSTTSESVFHTGYSRVTEMAI GSLCSCFVNYYILPFKVEKTLKNHATQGFDLTIAYIKEMFSTQDFSNNKKYNLKVENILNNLVTLDNDLSAAKYENIAKT NYAAFSNKVVELIQSVHFLRKNLAKKR
Sequences:
>Translated_267_residues MIKELIDDIPTIFNTQNAIHTFKACIAITLALGISMSLDLDKPMWAMIAALFLQTRPETGFIIEKALVLICGSIIGVGVG FLIVNFFLPYPVLALLALCLFIAVTMFFSANMSHPNFMYALAIANTTCNIVVFYAIADPTSTTSESVFHTGYSRVTEMAI GSLCSCFVNYYILPFKVEKTLKNHATQGFDLTIAYIKEMFSTQDFSNNKKYNLKVENILNNLVTLDNDLSAAKYENIAKT NYAAFSNKVVELIQSVHFLRKNLAKKR >Mature_267_residues MIKELIDDIPTIFNTQNAIHTFKACIAITLALGISMSLDLDKPMWAMIAALFLQTRPETGFIIEKALVLICGSIIGVGVG FLIVNFFLPYPVLALLALCLFIAVTMFFSANMSHPNFMYALAIANTTCNIVVFYAIADPTSTTSESVFHTGYSRVTEMAI GSLCSCFVNYYILPFKVEKTLKNHATQGFDLTIAYIKEMFSTQDFSNNKKYNLKVENILNNLVTLDNDLSAAKYENIAKT NYAAFSNKVVELIQSVHFLRKNLAKKR
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29781; Mature: 29781
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKELIDDIPTIFNTQNAIHTFKACIAITLALGISMSLDLDKPMWAMIAALFLQTRPETG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCCC FIIEKALVLICGSIIGVGVGFLIVNFFLPYPVLALLALCLFIAVTMFFSANMSHPNFMYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LAIANTTCNIVVFYAIADPTSTTSESVFHTGYSRVTEMAIGSLCSCFVNYYILPFKVEKT EEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKNHATQGFDLTIAYIKEMFSTQDFSNNKKYNLKVENILNNLVTLDNDLSAAKYENIAKT HHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH NYAAFSNKVVELIQSVHFLRKNLAKKR HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKELIDDIPTIFNTQNAIHTFKACIAITLALGISMSLDLDKPMWAMIAALFLQTRPETG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCCC FIIEKALVLICGSIIGVGVGFLIVNFFLPYPVLALLALCLFIAVTMFFSANMSHPNFMYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LAIANTTCNIVVFYAIADPTSTTSESVFHTGYSRVTEMAIGSLCSCFVNYYILPFKVEKT EEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKNHATQGFDLTIAYIKEMFSTQDFSNNKKYNLKVENILNNLVTLDNDLSAAKYENIAKT HHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH NYAAFSNKVVELIQSVHFLRKNLAKKR HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA