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The map label for this gene is ydhJ [H]

Identifier: 89256665

GI number: 89256665

Start: 1298928

End: 1299245

Strand: Direct

Name: ydhJ [H]

Synonym: FTL_1366

Alternate gene names: 89256665

Gene position: 1298928-1299245 (Clockwise)

Preceding gene: 89256664

Following gene: 89256666

Centisome position: 68.51

GC content: 33.96

Gene sequence:

>318_bases
ATGTCTTTAGTAAAAGCTGGCTCATTTTATGTCACCGGATATTTTGAGGAAACTAAACTACCGCATATTAAAATAGGTGA
CAAAGCCAAAATAATACTTATGAGTGGTGGAGAGCCATTATATGGACATGTGATAAGTATAGGTAAGGCAGTCGCTGATA
ATAATACTGATGTAAATAATCAACTTTTACCCAAAGTACAAGAAACCTATGACTGGGTAAGACTATCTAAGAGAATTCCT
GTTGATATTGCTCTAGATAAAGTACCAATCAATACAGAACTTGTATCAGGAATGAATGCAACGGTAACTATAAAATGA

Upstream 100 bases:

>100_bases
GATTAACCTAGACAGAACAAAGATATATGCTCATGCTGATGGAACTATCAACAACATTGACCTAAGACAAGGCAATTATG
TAGTATCTTCTAAACCAGTA

Downstream 100 bases:

>100_bases
TAAAAGAATTGATAGATGATATACCTACGATCTTTAATACACAAAATGCTATACATACATTTAAGGCATGTATAGCTATT
ACTCTAGCACTTGGAATATC

Product: membrane fusion protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSLVKAGSFYVTGYFEETKLPHIKIGDKAKIILMSGGEPLYGHVISIGKAVADNNTDVNNQLLPKVQETYDWVRLSKRIP
VDIALDKVPINTELVSGMNATVTIK

Sequences:

>Translated_105_residues
MSLVKAGSFYVTGYFEETKLPHIKIGDKAKIILMSGGEPLYGHVISIGKAVADNNTDVNNQLLPKVQETYDWVRLSKRIP
VDIALDKVPINTELVSGMNATVTIK
>Mature_104_residues
SLVKAGSFYVTGYFEETKLPHIKIGDKAKIILMSGGEPLYGHVISIGKAVADNNTDVNNQLLPKVQETYDWVRLSKRIPV
DIALDKVPINTELVSGMNATVTIK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=104, Percent_Identity=48.0769230769231, Blast_Score=105, Evalue=6e-25,
Organism=Escherichia coli, GI1789637, Length=104, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 11530; Mature: 11398

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVKAGSFYVTGYFEETKLPHIKIGDKAKIILMSGGEPLYGHVISIGKAVADNNTDVNN
CCEECCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCHHHHHEECCCEECCCCCCCCC
QLLPKVQETYDWVRLSKRIPVDIALDKVPINTELVSGMNATVTIK
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCEEEEEC
>Mature Secondary Structure 
SLVKAGSFYVTGYFEETKLPHIKIGDKAKIILMSGGEPLYGHVISIGKAVADNNTDVNN
CEECCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCHHHHHEECCCEECCCCCCCCC
QLLPKVQETYDWVRLSKRIPVDIALDKVPINTELVSGMNATVTIK
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]