| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is purN [H]
Identifier: 89255808
GI number: 89255808
Start: 367983
End: 368558
Strand: Direct
Name: purN [H]
Synonym: FTL_0397
Alternate gene names: 89255808
Gene position: 367983-368558 (Clockwise)
Preceding gene: 89255807
Following gene: 89255809
Centisome position: 19.41
GC content: 35.24
Gene sequence:
>576_bases ATGTCTAAGCTAAATCTTGTTATATTAGGCTCTACGCGTGGGACTAATATGCAAGCTATAATAGATGCAATAGCAAATAA GCAGCTAAATGCTCAGATAAGCCTAGTAATTTCAAATAAGTCAGATGCTTATATATTACAAATAGCAGCAGATTATAATA TCCCAACTAAATATATAGCAGCTAAAGGTTTGACTAGAGAGCAGTATGATGAGCTAGTTGTTGCTGAAATCCAAAAATAT AATCCAGATTTGATTTTGCTGATAGGCTTTATGCGTATTTTAAGCTCGGTGTTTATCAAAGCTTTTGAGGGTAAGATCTT AAATATTCATCCATCACTATTGCCAAAGCACCGAGGATTAATGGATTTGGCAGTGCATCAGTCAGTTATCGACGCTGGAG ATAGTATATCTGGATGCACTATCCATCAAGTAAGTGAAGAAGTCGATGGTGGTGATATAGTTTTGCAGTTAAAATGTGAT GTGGTGAAAGAAGATACGGCTGATAGCTTAAAAGAAAAAGTACAAGCCTTAGAGAGTAAAGCTTGGATAGAAGTTATTAA GAATTGGGATAAGTAA
Upstream 100 bases:
>100_bases ATTTCATCGTCCAGATATTGGTACTAAAGAGCTTATCAATAAGCGTATCAAACACATGAATTTGTTGCGTGGTGATAAAT ATCAGGAGCTTAAATAAATA
Downstream 100 bases:
>100_bases TTTTTAATAAATGCCATACTACGATTTGAGCGTAGAATCTATTGATAGATATGGTGAATGGATCCTATAGTTTAAGCATA GGATGACTGATTTGTGGGTT
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSKLNLVILGSTRGTNMQAIIDAIANKQLNAQISLVISNKSDAYILQIAADYNIPTKYIAAKGLTREQYDELVVAEIQKY NPDLILLIGFMRILSSVFIKAFEGKILNIHPSLLPKHRGLMDLAVHQSVIDAGDSISGCTIHQVSEEVDGGDIVLQLKCD VVKEDTADSLKEKVQALESKAWIEVIKNWDK
Sequences:
>Translated_191_residues MSKLNLVILGSTRGTNMQAIIDAIANKQLNAQISLVISNKSDAYILQIAADYNIPTKYIAAKGLTREQYDELVVAEIQKY NPDLILLIGFMRILSSVFIKAFEGKILNIHPSLLPKHRGLMDLAVHQSVIDAGDSISGCTIHQVSEEVDGGDIVLQLKCD VVKEDTADSLKEKVQALESKAWIEVIKNWDK >Mature_190_residues SKLNLVILGSTRGTNMQAIIDAIANKQLNAQISLVISNKSDAYILQIAADYNIPTKYIAAKGLTREQYDELVVAEIQKYN PDLILLIGFMRILSSVFIKAFEGKILNIHPSLLPKHRGLMDLAVHQSVIDAGDSISGCTIHQVSEEVDGGDIVLQLKCDV VKEDTADSLKEKVQALESKAWIEVIKNWDK
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=179, Percent_Identity=39.1061452513966, Blast_Score=128, Evalue=2e-30, Organism=Homo sapiens, GI209869995, Length=179, Percent_Identity=39.1061452513966, Blast_Score=128, Evalue=2e-30, Organism=Homo sapiens, GI209869993, Length=179, Percent_Identity=39.1061452513966, Blast_Score=128, Evalue=2e-30, Organism=Escherichia coli, GI1788846, Length=187, Percent_Identity=40.6417112299465, Blast_Score=148, Evalue=2e-37, Organism=Escherichia coli, GI1787483, Length=148, Percent_Identity=31.7567567567568, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI1789683, Length=142, Percent_Identity=30.9859154929577, Blast_Score=66, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567511, Length=180, Percent_Identity=38.8888888888889, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320616, Length=205, Percent_Identity=32.1951219512195, Blast_Score=86, Evalue=3e-18, Organism=Drosophila melanogaster, GI24582400, Length=185, Percent_Identity=38.3783783783784, Blast_Score=128, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 21103; Mature: 20972
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00373 GART
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLNLVILGSTRGTNMQAIIDAIANKQLNAQISLVISNKSDAYILQIAADYNIPTKYIA CCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHH AKGLTREQYDELVVAEIQKYNPDLILLIGFMRILSSVFIKAFEGKILNIHPSLLPKHRGL HCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCH MDLAVHQSVIDAGDSISGCTIHQVSEEVDGGDIVLQLKCDVVKEDTADSLKEKVQALESK HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH AWIEVIKNWDK HHHHHHHCCCC >Mature Secondary Structure SKLNLVILGSTRGTNMQAIIDAIANKQLNAQISLVISNKSDAYILQIAADYNIPTKYIA CCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHH AKGLTREQYDELVVAEIQKYNPDLILLIGFMRILSSVFIKAFEGKILNIHPSLLPKHRGL HCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCH MDLAVHQSVIDAGDSISGCTIHQVSEEVDGGDIVLQLKCDVVKEDTADSLKEKVQALESK HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH AWIEVIKNWDK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]