| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is lemA [H]
Identifier: 89255782
GI number: 89255782
Start: 337139
End: 337714
Strand: Reverse
Name: lemA [H]
Synonym: FTL_0361
Alternate gene names: 89255782
Gene position: 337714-337139 (Counterclockwise)
Preceding gene: 89255784
Following gene: 89255781
Centisome position: 17.81
GC content: 32.64
Gene sequence:
>576_bases ATGTCTATAGGGATAATTCTACTCATAATAGTAGTTGTAATAGCGGTATATGTGGTTATGACATACAACAAGCTAATTGC GGAAATTGAAACTGTTAAAAACTCTGAGAAACAAATAGATGTACAATTAGATCGACGTGCTAAGGTATTTGACTCGTTAG TTAATGTGGTCAAAAAATATATGGACTATGAGCAAACAACTTTAAAGCAAGTAGTAGCGCTGAGAAACCAAGCTAATCTT GCCAAAGAAAACGGTGATATCCAAGAAAGAATAAATGCTGAAAATAAGATTTCTGATCTTGCTAAAGGAATAAATGTACA ATTTGAAAATTATCCAGAGTTAAAAGCTAACCAGAATGTAATCCAGCTTCAAGAAGAAATCACATCTACTGAGAATAAGC TTGCTTTTGCTAAACAAGCGCTCAATGACTCAATAGAAAGATATAACGCGCATAAAAAGTCTTTCTTTGCTGGTATCGTG GTTAGCATATTTAAAAAGCTTAATGAAGACTTTGTTTACTGGAATATTTCTGAAGAGAAAAAACAACAACTAGAAGATTC AAGAGTGGAACTATAA
Upstream 100 bases:
>100_bases TAGAGAAAGATATAAATGGTTGTGATATAAGGCTTGAAAATTTTAGTATTTAACGTCATCTTTATACACAGACGGTTAAA TCTAAATCTAAGGAGATAAA
Downstream 100 bases:
>100_bases AAAATGTCAGCTGCTGATAATTTAGAATATGGCTCTGTAAATTGGCGCGAAGTTGTACGTAAGAACACTTATCGCACTTA TTTTGTAATCGCAACATTCC
Product: LemA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSIGIILLIIVVVIAVYVVMTYNKLIAEIETVKNSEKQIDVQLDRRAKVFDSLVNVVKKYMDYEQTTLKQVVALRNQANL AKENGDIQERINAENKISDLAKGINVQFENYPELKANQNVIQLQEEITSTENKLAFAKQALNDSIERYNAHKKSFFAGIV VSIFKKLNEDFVYWNISEEKKQQLEDSRVEL
Sequences:
>Translated_191_residues MSIGIILLIIVVVIAVYVVMTYNKLIAEIETVKNSEKQIDVQLDRRAKVFDSLVNVVKKYMDYEQTTLKQVVALRNQANL AKENGDIQERINAENKISDLAKGINVQFENYPELKANQNVIQLQEEITSTENKLAFAKQALNDSIERYNAHKKSFFAGIV VSIFKKLNEDFVYWNISEEKKQQLEDSRVEL >Mature_190_residues SIGIILLIIVVVIAVYVVMTYNKLIAEIETVKNSEKQIDVQLDRRAKVFDSLVNVVKKYMDYEQTTLKQVVALRNQANLA KENGDIQERINAENKISDLAKGINVQFENYPELKANQNVIQLQEEITSTENKLAFAKQALNDSIERYNAHKKSFFAGIVV SIFKKLNEDFVYWNISEEKKQQLEDSRVEL
Specific function: Unknown
COG id: COG1704
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LemA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007156 [H]
Pfam domain/function: PF04011 LemA [H]
EC number: NA
Molecular weight: Translated: 21987; Mature: 21855
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGIILLIIVVVIAVYVVMTYNKLIAEIETVKNSEKQIDVQLDRRAKVFDSLVNVVKKY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MDYEQTTLKQVVALRNQANLAKENGDIQERINAENKISDLAKGINVQFENYPELKANQNV HCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHH IQLQEEITSTENKLAFAKQALNDSIERYNAHKKSFFAGIVVSIFKKLNEDFVYWNISEEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH KQQLEDSRVEL HHHHHHHHCCC >Mature Secondary Structure SIGIILLIIVVVIAVYVVMTYNKLIAEIETVKNSEKQIDVQLDRRAKVFDSLVNVVKKY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MDYEQTTLKQVVALRNQANLAKENGDIQERINAENKISDLAKGINVQFENYPELKANQNV HCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHH IQLQEEITSTENKLAFAKQALNDSIERYNAHKKSFFAGIVVSIFKKLNEDFVYWNISEEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH KQQLEDSRVEL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11860552 [H]