| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is htpX [H]
Identifier: 89255781
GI number: 89255781
Start: 336062
End: 337135
Strand: Reverse
Name: htpX [H]
Synonym: FTL_0360
Alternate gene names: 89255781
Gene position: 337135-336062 (Counterclockwise)
Preceding gene: 89255782
Following gene: 89255780
Centisome position: 17.78
GC content: 32.96
Gene sequence:
>1074_bases ATGTCAGCTGCTGATAATTTAGAATATGGCTCTGTAAATTGGCGCGAAGTTGTACGTAAGAACACTTATCGCACTTATTT TGTAATCGCAACATTCCTTATAGTATTTTTCTTATTAGGAATCTTTATTGATACAATATGGCGCTATAGTGAATTTGTAA ATGCACACTACAGTTATTATAATAGTCAGCCACAAATATCAATAGGGAAAGTATTCTTGTTGTTATTGACATTTCAAATA CCTCCTTATGCGACTATGATAATCTCTACTGTAGCAGTAATTTGGGTATTTGTTACATTTAGCATGTACGATAAGATCAT GCTCTCTGGCACAGAATATCAAGAAATTACTGCAGATAATCAAGATCCACTAGCTCGCCGTGTTTATAATGTCGTTGAAG AGATGAAAGTTGCTGCTGATATGCGATATATGCCTAAAGTATTTCTTATCGATGCTAATTATATGAATGCTTTTGCATCA GGATATTCTGAAAAATCCGCAATGGTGGCTATCACTACAAAACTTGCAAACGCACTTAATCGTGATGAACTACAAGCAGC TATGGCACATGAGCTAACTCATATTAGAAACCAAGATATCAAGTTAAATTTATTTACTATGGTTTTATCAAATATGATGC TTATTATTATGGACTTTTTATTTTATTCAGCACTTTTCTCAAGCAATAGTAATAACAATAATAACAACCGTAATAATAAT GCTGCTGCATTTTTTATCATCATTATGATCTTAAGATATGTGTTACAAATATTTACGATATTTATGATGTTATTTTTAAG TCGTACGCGAGAATATATGGCTGATGCTGGTGCTGTTGAGCTAATGCGTACTAACATGCCGATGGCAAATGCATTAATAA AAATTGCAAACGACAGTAAATCTGTAGAAGCTCAATACAGCTACAAGCATAATAAAAATGAAAATTTACGTCGAGCATCG TATATTTTTGATCCACTTAGTGCTGGAATCAGCAGTGGTGATATGTCTGATTTATTTTCCACTCACCCTTCTATCGAAAA AAGACTTGCTTCAATTGGTGTAAAACTTAGATAA
Upstream 100 bases:
>100_bases GGTTAGCATATTTAAAAAGCTTAATGAAGACTTTGTTTACTGGAATATTTCTGAAGAGAAAAAACAACAACTAGAAGATT CAAGAGTGGAACTATAAAAA
Downstream 100 bases:
>100_bases TCCAGCCAATTTATCCATCAATTAAAAACCTTTTAATACTTATTTTAGCCTACTATTAGTAAAGAAATAGGCTATAATTA AATGGCTAAGAAATAGGTTT
Product: heat shock protein HtpX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSAADNLEYGSVNWREVVRKNTYRTYFVIATFLIVFFLLGIFIDTIWRYSEFVNAHYSYYNSQPQISIGKVFLLLLTFQI PPYATMIISTVAVIWVFVTFSMYDKIMLSGTEYQEITADNQDPLARRVYNVVEEMKVAADMRYMPKVFLIDANYMNAFAS GYSEKSAMVAITTKLANALNRDELQAAMAHELTHIRNQDIKLNLFTMVLSNMMLIIMDFLFYSALFSSNSNNNNNNRNNN AAAFFIIIMILRYVLQIFTIFMMLFLSRTREYMADAGAVELMRTNMPMANALIKIANDSKSVEAQYSYKHNKNENLRRAS YIFDPLSAGISSGDMSDLFSTHPSIEKRLASIGVKLR
Sequences:
>Translated_357_residues MSAADNLEYGSVNWREVVRKNTYRTYFVIATFLIVFFLLGIFIDTIWRYSEFVNAHYSYYNSQPQISIGKVFLLLLTFQI PPYATMIISTVAVIWVFVTFSMYDKIMLSGTEYQEITADNQDPLARRVYNVVEEMKVAADMRYMPKVFLIDANYMNAFAS GYSEKSAMVAITTKLANALNRDELQAAMAHELTHIRNQDIKLNLFTMVLSNMMLIIMDFLFYSALFSSNSNNNNNNRNNN AAAFFIIIMILRYVLQIFTIFMMLFLSRTREYMADAGAVELMRTNMPMANALIKIANDSKSVEAQYSYKHNKNENLRRAS YIFDPLSAGISSGDMSDLFSTHPSIEKRLASIGVKLR >Mature_356_residues SAADNLEYGSVNWREVVRKNTYRTYFVIATFLIVFFLLGIFIDTIWRYSEFVNAHYSYYNSQPQISIGKVFLLLLTFQIP PYATMIISTVAVIWVFVTFSMYDKIMLSGTEYQEITADNQDPLARRVYNVVEEMKVAADMRYMPKVFLIDANYMNAFASG YSEKSAMVAITTKLANALNRDELQAAMAHELTHIRNQDIKLNLFTMVLSNMMLIIMDFLFYSALFSSNSNNNNNNRNNNA AAFFIIIMILRYVLQIFTIFMMLFLSRTREYMADAGAVELMRTNMPMANALIKIANDSKSVEAQYSYKHNKNENLRRASY IFDPLSAGISSGDMSDLFSTHPSIEKRLASIGVKLR
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=212, Percent_Identity=27.3584905660377, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 41005; Mature: 40874
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAADNLEYGSVNWREVVRKNTYRTYFVIATFLIVFFLLGIFIDTIWRYSEFVNAHYSYY CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSQPQISIGKVFLLLLTFQIPPYATMIISTVAVIWVFVTFSMYDKIMLSGTEYQEITADN CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC QDPLARRVYNVVEEMKVAADMRYMPKVFLIDANYMNAFASGYSEKSAMVAITTKLANALN CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCCHHEEHHHHHHHHHC RDELQAAMAHELTHIRNQDIKLNLFTMVLSNMMLIIMDFLFYSALFSSNSNNNNNNRNNN HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AAAFFIIIMILRYVLQIFTIFMMLFLSRTREYMADAGAVELMRTNMPMANALIKIANDSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCC SVEAQYSYKHNKNENLRRASYIFDPLSAGISSGDMSDLFSTHPSIEKRLASIGVKLR CCEEHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure SAADNLEYGSVNWREVVRKNTYRTYFVIATFLIVFFLLGIFIDTIWRYSEFVNAHYSYY CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSQPQISIGKVFLLLLTFQIPPYATMIISTVAVIWVFVTFSMYDKIMLSGTEYQEITADN CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC QDPLARRVYNVVEEMKVAADMRYMPKVFLIDANYMNAFASGYSEKSAMVAITTKLANALN CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCCHHEEHHHHHHHHHC RDELQAAMAHELTHIRNQDIKLNLFTMVLSNMMLIIMDFLFYSALFSSNSNNNNNNRNNN HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AAAFFIIIMILRYVLQIFTIFMMLFLSRTREYMADAGAVELMRTNMPMANALIKIANDSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCC SVEAQYSYKHNKNENLRRASYIFDPLSAGISSGDMSDLFSTHPSIEKRLASIGVKLR CCEEHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]