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The map label for this gene is cry2 [H]

Identifier: 89255766

GI number: 89255766

Start: 322181

End: 322786

Strand: Direct

Name: cry2 [H]

Synonym: FTL_0341

Alternate gene names: 89255766

Gene position: 322181-322786 (Clockwise)

Preceding gene: 89255765

Following gene: 89255767

Centisome position: 16.99

GC content: 34.49

Gene sequence:

>606_bases
ATGAGTCATAGGCAATATTTGTTTTTATCAGAGTGTCTAGAAGAGCTAAATACTGAGCTTACAAAATTGGGTCAATCTTT
AGCTATAATGCTAGGGGATGCTGTAGAGATTTTTGAGCAGCTAATACAAAAATATAATATAAAGAATGTTTGGTCGCATC
AAGAAACTTGGAATGACTGGACATATCAGCGAGATATTAAACTTGAGAAATTTTTTAAACAGAATAATATTGTATGGCAT
CAACCATATCAAAATGGTGTAGTTCGTTGTTTAGCTGATAGAGATAACTGGGCTTTGTTATGGCATCAGCGCATGAGTGA
AAAGATTATAAGAGCGCCTACCAAACTTAAGTTTATTTGCGAAAACCAAATCAAAATACCTACTGCTGAGAGCCTTGATC
TAGAGTATGATGATTGTTACAAAAGACAAAAAGGCGGTCGAATTCGTGCACTTAGAATTCTTGATAGTTTTTTATATCAA
AGGGGGTGCGGCTATACCAAAGAAATGTCTTCACCTGTAACAGCTTTTAAAAGTTGTTCAAGGTTATCGCCATATATAGC
TTTTGGAGTTATTTCGTTAAAAGAGATATACCAGAAAGCTAATTAG

Upstream 100 bases:

>100_bases
CTTACGCGTAACTGATAACTTAGCTTTATCATTAGCCTCTAAAAAAGGAGATATTTTACCACTATACATAATTGAACCTG
AACTTTGGCAACAGCCTGAT

Downstream 100 bases:

>100_bases
CGTAAAAATGAAATCAAAGAAAGTAGCGTAAAAAATAAAACAAAATGGTTAAGTGCAATGCGTTCATTTTTATCACGTTT
GCGTTGGCATTGTCATTTTA

Product: deoxyribodipyrimidine photolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSHRQYLFLSECLEELNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDWTYQRDIKLEKFFKQNNIVWH
QPYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFICENQIKIPTAESLDLEYDDCYKRQKGGRIRALRILDSFLYQ
RGCGYTKEMSSPVTAFKSCSRLSPYIAFGVISLKEIYQKAN

Sequences:

>Translated_201_residues
MSHRQYLFLSECLEELNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDWTYQRDIKLEKFFKQNNIVWH
QPYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFICENQIKIPTAESLDLEYDDCYKRQKGGRIRALRILDSFLYQ
RGCGYTKEMSSPVTAFKSCSRLSPYIAFGVISLKEIYQKAN
>Mature_200_residues
SHRQYLFLSECLEELNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDWTYQRDIKLEKFFKQNNIVWHQ
PYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFICENQIKIPTAESLDLEYDDCYKRQKGGRIRALRILDSFLYQR
GCGYTKEMSSPVTAFKSCSRLSPYIAFGVISLKEIYQKAN

Specific function: Has no photolyase activity [H]

COG id: COG0415

COG function: function code L; Deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DNA photolyase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002081
- InterPro:   IPR018394
- InterPro:   IPR006050
- InterPro:   IPR005101
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00875 DNA_photolyase; PF03441 FAD_binding_7 [H]

EC number: NA

Molecular weight: Translated: 23815; Mature: 23683

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRQYLFLSECLEELNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCC
TYQRDIKLEKFFKQNNIVWHQPYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFIC
CCHHCCHHHHHHHHCCCEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEE
ENQIKIPTAESLDLEYDDCYKRQKGGRIRALRILDSFLYQRGCGYTKEMSSPVTAFKSCS
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH
RLSPYIAFGVISLKEIYQKAN
HCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHRQYLFLSECLEELNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCC
TYQRDIKLEKFFKQNNIVWHQPYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFIC
CCHHCCHHHHHHHHCCCEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEE
ENQIKIPTAESLDLEYDDCYKRQKGGRIRALRILDSFLYQRGCGYTKEMSSPVTAFKSCS
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH
RLSPYIAFGVISLKEIYQKAN
HCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]