| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is ynjF [C]
Identifier: 89255710
GI number: 89255710
Start: 264165
End: 264764
Strand: Direct
Name: ynjF [C]
Synonym: FTL_0278
Alternate gene names: 89255710
Gene position: 264165-264764 (Clockwise)
Preceding gene: 89255709
Following gene: 89255711
Centisome position: 13.93
GC content: 29.33
Gene sequence:
>600_bases ATGATAGAGCAGAAAATTAGACCAGTTTTTCAGAGAATATTTGTTGATGGTATTGCTAAGTTTATTGCGCCTGTGATAGC ACCTAATTTAATCACACTAATATCGTTGATAGTTGGTTTGGTTGCTGCAATAGCTTTTTTTATAAATCAGTATTTATGTA TATTTTTGTTATTACGGTCTGGATATTTTGATATTTTAGATGGTTCGGTTGCACGCTTACAAGGTAGTTCTTCATCATTT GGGACTATCTTAGATATTTTGAGTGATCGTTTCGTTGAAAGTTTTATTATTATTGCAATTTTCATTAATCAGCTTGATAT AGCATGGGTTGGTTTATTAATGATGATGTCTATAATTGTTTGTATTAGTAGTTTTTTGTTAGTAGGGATTTTCAGTCAAA AAGAATCATCAAAGAGTTTTTACTATAGTCCTGGCTTGATTGAGAGAGCCGAAACATTTATATTCTTTATTGTAATGATT TTATTTCCTAATATAGTAGTTGTATTAGGATTGATTTATACATTATTAGTTTTATGGACAACGCTATATCGTTGCTATGA GTTTTATGTTTATGATAAGCAAAGGAGTAAATTTCAATGA
Upstream 100 bases:
>100_bases TAAATAAAAGATTGGCTGGTAACTACTTTATACCAGTATTGTATAGCAATAAAGTTAGGAGCCTAGTTAGATTTTTAATA AAAATATTTGTTAAAAAACT
Downstream 100 bases:
>100_bases AAAAATTTTTGAATAACACTTTTATTGGTTTTATGGCTGGTTTAATTAGTGCTTGTATCTTGTACTTTATTTTCACTCTT ATCCGTCAGCATGGTGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome Oxidase-Like Protein; Phosphatidoglycerophosphate Synthase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MIEQKIRPVFQRIFVDGIAKFIAPVIAPNLITLISLIVGLVAAIAFFINQYLCIFLLLRSGYFDILDGSVARLQGSSSSF GTILDILSDRFVESFIIIAIFINQLDIAWVGLLMMMSIIVCISSFLLVGIFSQKESSKSFYYSPGLIERAETFIFFIVMI LFPNIVVVLGLIYTLLVLWTTLYRCYEFYVYDKQRSKFQ
Sequences:
>Translated_199_residues MIEQKIRPVFQRIFVDGIAKFIAPVIAPNLITLISLIVGLVAAIAFFINQYLCIFLLLRSGYFDILDGSVARLQGSSSSF GTILDILSDRFVESFIIIAIFINQLDIAWVGLLMMMSIIVCISSFLLVGIFSQKESSKSFYYSPGLIERAETFIFFIVMI LFPNIVVVLGLIYTLLVLWTTLYRCYEFYVYDKQRSKFQ >Mature_199_residues MIEQKIRPVFQRIFVDGIAKFIAPVIAPNLITLISLIVGLVAAIAFFINQYLCIFLLLRSGYFDILDGSVARLQGSSSSF GTILDILSDRFVESFIIIAIFINQLDIAWVGLLMMMSIIVCISSFLLVGIFSQKESSKSFYYSPGLIERAETFIFFIVMI LFPNIVVVLGLIYTLLVLWTTLYRCYEFYVYDKQRSKFQ
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22713; Mature: 22713
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQKIRPVFQRIFVDGIAKFIAPVIAPNLITLISLIVGLVAAIAFFINQYLCIFLLLRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYFDILDGSVARLQGSSSSFGTILDILSDRFVESFIIIAIFINQLDIAWVGLLMMMSIIV CCHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CISSFLLVGIFSQKESSKSFYYSPGLIERAETFIFFIVMILFPNIVVVLGLIYTLLVLWT HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYRCYEFYVYDKQRSKFQ HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEQKIRPVFQRIFVDGIAKFIAPVIAPNLITLISLIVGLVAAIAFFINQYLCIFLLLRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYFDILDGSVARLQGSSSSFGTILDILSDRFVESFIIIAIFINQLDIAWVGLLMMMSIIV CCHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CISSFLLVGIFSQKESSKSFYYSPGLIERAETFIFFIVMILFPNIVVVLGLIYTLLVLWT HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYRCYEFYVYDKQRSKFQ HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA