| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255516
Identifier: 89255516
GI number: 89255516
Start: 70687
End: 71679
Strand: Reverse
Name: 89255516
Synonym: FTL_0073
Alternate gene names: NA
Gene position: 71679-70687 (Counterclockwise)
Preceding gene: 89255517
Following gene: 89255513
Centisome position: 3.78
GC content: 33.94
Gene sequence:
>993_bases ATGGAATTTAGTATGCGCAATATATTCAAAAAAACATTATTAATATTATTACTAAGCGTAATTATAGCATCATGTGGTAT GCTATCTAACGACCAGTTTGTTTATCTAGGTCATGGTGAGAACTCTCCTGACTATCAGCTCTATTACGATAAGACACAAA AACTTTTTGTGCTAATTGATAAGAGAAATGGTTGTTTTCAGAAAGATGATACAGGTACTTGTCTTGCATTTACATTAAAA CAAGCTCGTGAATTTAGAGAATATGTTTTAGCTAAGATGATTGAAATAGATGTTAGACTTGCTAAGGACGACTATGGAAA CTACGCTATTGAAGAGTTACGAAAAGCTGGGGTTACCACGGTTAATAAACCAATTAAAACTAAAAAAGTTTTTGCAACTC CAGTTAAGCAGATTGTCCTTGATAGAAAGCAACAATATCACCTTGTTAGAAAAGAATATGAAATAGATTCAAATCTTGTA GCAATGGTTGTTAATGATAAAGAAGGTAAAAAACGTATAAAAGTTGCTTATACTGTTTATTTTCCTGGCTTAGAGAAAGA GTATAGTACCGAGCTTAGACCATTTATTATTGATCCAGAATACTTATATACACATATGACTATTGACGCTGTCCATGAAG CTCAATTCATGCAGAGAGATGTTATGAAGAGTCAAACAAATGTCAAAAAGAAAGTTGATGACTATCTTAAAGATGTTGTC GACAGCGATAAAAAAGATACAGGATACACTCACCAAGAAGTTGCAAGTAGTGTCGCAGCGCTAGATAACGATCTAATAAC TAAGGCAGATGAGCAACGCGAAGACAAAGAAACCACACTAGCAAGTGGTAGTAGTATTAGTACTATAGCGAAAAAGCCTA TCAATCAAGAAAGTAGTGGTAGTACAATACAAACAGCCACAAAAACTGCTTCAACCACTCAAGTTGATAGCAATGATACT CCAAAAACAACTCTAGCAAGTGACAATAAATAG
Upstream 100 bases:
>100_bases AGAAAATGCTAAGAGTTAATTTTTGATTATTTTGTATAATCAATACTTTACTTTTTAGCAGCATTACGCAAAAATTATCT CCTGTAATTGTTATTAAATC
Downstream 100 bases:
>100_bases AAATTAAATAAGAGTAATTCTAAATAATTACTCCCCCACCTAAGCAAACATCATCAATATAAAATACTACTGACTGTCCT GGTGTGATTGCTCTTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MEFSMRNIFKKTLLILLLSVIIASCGMLSNDQFVYLGHGENSPDYQLYYDKTQKLFVLIDKRNGCFQKDDTGTCLAFTLK QAREFREYVLAKMIEIDVRLAKDDYGNYAIEELRKAGVTTVNKPIKTKKVFATPVKQIVLDRKQQYHLVRKEYEIDSNLV AMVVNDKEGKKRIKVAYTVYFPGLEKEYSTELRPFIIDPEYLYTHMTIDAVHEAQFMQRDVMKSQTNVKKKVDDYLKDVV DSDKKDTGYTHQEVASSVAALDNDLITKADEQREDKETTLASGSSISTIAKKPINQESSGSTIQTATKTASTTQVDSNDT PKTTLASDNK
Sequences:
>Translated_330_residues MEFSMRNIFKKTLLILLLSVIIASCGMLSNDQFVYLGHGENSPDYQLYYDKTQKLFVLIDKRNGCFQKDDTGTCLAFTLK QAREFREYVLAKMIEIDVRLAKDDYGNYAIEELRKAGVTTVNKPIKTKKVFATPVKQIVLDRKQQYHLVRKEYEIDSNLV AMVVNDKEGKKRIKVAYTVYFPGLEKEYSTELRPFIIDPEYLYTHMTIDAVHEAQFMQRDVMKSQTNVKKKVDDYLKDVV DSDKKDTGYTHQEVASSVAALDNDLITKADEQREDKETTLASGSSISTIAKKPINQESSGSTIQTATKTASTTQVDSNDT PKTTLASDNK >Mature_330_residues MEFSMRNIFKKTLLILLLSVIIASCGMLSNDQFVYLGHGENSPDYQLYYDKTQKLFVLIDKRNGCFQKDDTGTCLAFTLK QAREFREYVLAKMIEIDVRLAKDDYGNYAIEELRKAGVTTVNKPIKTKKVFATPVKQIVLDRKQQYHLVRKEYEIDSNLV AMVVNDKEGKKRIKVAYTVYFPGLEKEYSTELRPFIIDPEYLYTHMTIDAVHEAQFMQRDVMKSQTNVKKKVDDYLKDVV DSDKKDTGYTHQEVASSVAALDNDLITKADEQREDKETTLASGSSISTIAKKPINQESSGSTIQTATKTASTTQVDSNDT PKTTLASDNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37518; Mature: 37518
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSMRNIFKKTLLILLLSVIIASCGMLSNDQFVYLGHGENSPDYQLYYDKTQKLFVLID CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEEE KRNGCFQKDDTGTCLAFTLKQAREFREYVLAKMIEIDVRLAKDDYGNYAIEELRKAGVTT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCC VNKPIKTKKVFATPVKQIVLDRKQQYHLVRKEYEIDSNLVAMVVNDKEGKKRIKVAYTVY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEE FPGLEKEYSTELRPFIIDPEYLYTHMTIDAVHEAQFMQRDVMKSQTNVKKKVDDYLKDVV ECCCCCHHCCCCCCEEECCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSDKKDTGYTHQEVASSVAALDNDLITKADEQREDKETTLASGSSISTIAKKPINQESSG CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC STIQTATKTASTTQVDSNDTPKTTLASDNK CEEEEHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEFSMRNIFKKTLLILLLSVIIASCGMLSNDQFVYLGHGENSPDYQLYYDKTQKLFVLID CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEEE KRNGCFQKDDTGTCLAFTLKQAREFREYVLAKMIEIDVRLAKDDYGNYAIEELRKAGVTT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCC VNKPIKTKKVFATPVKQIVLDRKQQYHLVRKEYEIDSNLVAMVVNDKEGKKRIKVAYTVY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEE FPGLEKEYSTELRPFIIDPEYLYTHMTIDAVHEAQFMQRDVMKSQTNVKKKVDDYLKDVV ECCCCCHHCCCCCCEEECCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSDKKDTGYTHQEVASSVAALDNDLITKADEQREDKETTLASGSSISTIAKKPINQESSG CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC STIQTATKTASTTQVDSNDTPKTTLASDNK CEEEEHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA