| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056672
Identifier: 89056672
GI number: 89056672
Start: 4290679
End: 4291185
Strand: Direct
Name: 89056672
Synonym: Jann_4181
Alternate gene names: NA
Gene position: 4290679-4291185 (Clockwise)
Preceding gene: 89056667
Following gene: 89056673
Centisome position: 99.37
GC content: 58.19
Gene sequence:
>507_bases ATGTCAGAAGACGCAAACATCGAAGAACCTAAGAAGAAGAAGGGCTTACTCGTGCCACTTCTCCTGGGTGTGATTCTTGC CGCTGCCGGCGGCGGTGGTGGCTTCTGGGCCGTGACACAGGGCCCCCTTGCGCCCGAAAGCACGATGGAGACGCCCGTAG AAACCGCGGCAGAGCACGATGACGATGCCACCCACATGGATGCGGTCGACGTCGCCTTCCTAGAGCTGGAAACGCTGGTG ATCACATTGGGCGCCGAAGAATCGAATCGGAACCTGATCTTCTCCGCATCTCTGGAGATCGCCCCGCAATATCTGGATGA AGTGACTCAGCTCTCGCCAAGGGTTCTCGACGTCCTCAACTCCTATTTGCGCGTGATCGCCATCTCCGAGCTGAGCGAAC CGACAAGCCTCGCACGTCTTCGGTCCCAAATGCTGCGCCGCATCCAGGTGGTGACCGGCACTGGCCGAGTTCAAAACCTC CTCGTCACACAATTTCTGGTGAACTGA
Upstream 100 bases:
>100_bases GTTCTGGCCCGATGTGGTCAGACATACCCGTCACACGATTAACAATCGGTTAGTGCATTGGCGCTAAAACGAATGAGAAC GAAACAAGATCGTGTGTGAG
Downstream 100 bases:
>100_bases ATGACTCTTCTCATGACCTACGGTGCTGACATCCTGATCATCTTCGCGAGCCTTGGAGCGATGACTTACTGCATGGTTCT TTCTCGACGCCTGTCGCGCC
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSEDANIEEPKKKKGLLVPLLLGVILAAAGGGGGFWAVTQGPLAPESTMETPVETAAEHDDDATHMDAVDVAFLELETLV ITLGAEESNRNLIFSASLEIAPQYLDEVTQLSPRVLDVLNSYLRVIAISELSEPTSLARLRSQMLRRIQVVTGTGRVQNL LVTQFLVN
Sequences:
>Translated_168_residues MSEDANIEEPKKKKGLLVPLLLGVILAAAGGGGGFWAVTQGPLAPESTMETPVETAAEHDDDATHMDAVDVAFLELETLV ITLGAEESNRNLIFSASLEIAPQYLDEVTQLSPRVLDVLNSYLRVIAISELSEPTSLARLRSQMLRRIQVVTGTGRVQNL LVTQFLVN >Mature_167_residues SEDANIEEPKKKKGLLVPLLLGVILAAAGGGGGFWAVTQGPLAPESTMETPVETAAEHDDDATHMDAVDVAFLELETLVI TLGAEESNRNLIFSASLEIAPQYLDEVTQLSPRVLDVLNSYLRVIAISELSEPTSLARLRSQMLRRIQVVTGTGRVQNLL VTQFLVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18153; Mature: 18022
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDANIEEPKKKKGLLVPLLLGVILAAAGGGGGFWAVTQGPLAPESTMETPVETAAEHD CCCCCCCCCCHHHCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHHHHCCC DDATHMDAVDVAFLELETLVITLGAEESNRNLIFSASLEIAPQYLDEVTQLSPRVLDVLN CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEHHHHCHHHHHHHHHCCHHHHHHHH SYLRVIAISELSEPTSLARLRSQMLRRIQVVTGTGRVQNLLVTQFLVN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SEDANIEEPKKKKGLLVPLLLGVILAAAGGGGGFWAVTQGPLAPESTMETPVETAAEHD CCCCCCCCCHHHCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHHHHCCC DDATHMDAVDVAFLELETLVITLGAEESNRNLIFSASLEIAPQYLDEVTQLSPRVLDVLN CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEHHHHCHHHHHHHHHCCHHHHHHHH SYLRVIAISELSEPTSLARLRSQMLRRIQVVTGTGRVQNLLVTQFLVN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA