| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is flgI
Identifier: 89056667
GI number: 89056667
Start: 4285403
End: 4286506
Strand: Direct
Name: flgI
Synonym: Jann_4176
Alternate gene names: 89056667
Gene position: 4285403-4286506 (Clockwise)
Preceding gene: 89056666
Following gene: 89056672
Centisome position: 99.25
GC content: 58.15
Gene sequence:
>1104_bases GTGATCCGGATATTCTCATTTTTCCTCGTGGCTTGCATTTTCGCGACCGCAGCTGTCGCAACTCCAATCCGGATAAAGGA TTTGGTGGAGTTCGATGGTGTGCGCGGGAACGATCTGGTTGGGTACGGTCTGATCGTCGGCCTGAACGGAACCGGGGATG GGCTACGAAATGCGCCGTTCACCGAGGAAATTATGGTAAACGTCTTGGAAAGATTGGGCGTGAACGTAACCGGCGAACAG TTTCGCCCTCAAAATGTCGCAGCGGTTATCGTAACTGCCACTCTGCCGCCGTTTTCCAGACAAGGCGGGCAAATCGATAT CACGGTTTCGGCAATCGGAGACGCCGAAAGCCTACTCGGCGGCACTCTTGTCATGACTCCGCTGACCGCGGCCGATGGAG AGATCTATGCCGTTGCCCAAGGTGCAGTTATTGCGGGCGGCGCATCTGCCGGCGGCGATGGTGCCGAAATCATACAGGGT GTGCCTACCGCTGGCGTCATACCCGCCGGCGCTAGGGTCGAACGGGAGGTCGAGTTTGATTTTGCAAGCATGTCGCAAAT CAGGTTGGCGCTGCGCACACCAGATTTCACGACAGCTGCGCGGATCGAAGTGGCTATCAACACCGAATTCGGCCGCGGCG TCGCCTCGATGTTAGATTCGGGTACCGTTCTGCTCGATATCAGCGCGACCCGCGCGCCATCTCCGGCTCATGCCCTGACG CGTGTTGAGAACATTCTGGTGGTGCCTGAAACGCGCGCCCGGGTTGTTGTCGATCAGCGTTCTGGCACGATTGTCATGGG CGAAGACGTCCGCATTAGCCGTGTGGCAGTCGCGCAGGGCAACCTAACGCTGAGGATCCAGGAGGAGCCTATTGCTGTTC AGCCAAATCCATTCGCAGAAGGTGAAACCGTCATTCTTCCCCGCACCAATGCTGGCCTGGCGGAAGAAGCCGGTACCGGA TTGGCAGAACTCTCGGGCGGCACGTCTCTGTCGGAAGTGGTCGGCGCACTTAATGCACTCGGCGTGTCTCCCCGTGATAT GATAGACATTCTGTCGAGCATCGAAGCCGCTGGCGCCCTGCATGCGGAGTTCATCGTACGGTAG
Upstream 100 bases:
>100_bases ACGACACGGCAACGGAATTGGAGGCTATCTCTCTCCGTCTCGAAAGCCTGTATATTGTGACCGCGCGCGTCTCGCGCTTG AGCTTGACGGAGTACCTCAG
Downstream 100 bases:
>100_bases TCGAGCATACACCGCGGCCGGGTAGCGAAGTTCCGGCCCGGTGACGAGCCCAAGAAGCTGTCTGCCCGCCGTCCCAGTCA CTACGCATATTGGTGAAGTT
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIRIFSFFLVACIFATAAVATPIRIKDLVEFDGVRGNDLVGYGLIVGLNGTGDGLRNAPFTEEIMVNVLERLGVNVTGEQ FRPQNVAAVIVTATLPPFSRQGGQIDITVSAIGDAESLLGGTLVMTPLTAADGEIYAVAQGAVIAGGASAGGDGAEIIQG VPTAGVIPAGARVEREVEFDFASMSQIRLALRTPDFTTAARIEVAINTEFGRGVASMLDSGTVLLDISATRAPSPAHALT RVENILVVPETRARVVVDQRSGTIVMGEDVRISRVAVAQGNLTLRIQEEPIAVQPNPFAEGETVILPRTNAGLAEEAGTG LAELSGGTSLSEVVGALNALGVSPRDMIDILSSIEAAGALHAEFIVR
Sequences:
>Translated_367_residues MIRIFSFFLVACIFATAAVATPIRIKDLVEFDGVRGNDLVGYGLIVGLNGTGDGLRNAPFTEEIMVNVLERLGVNVTGEQ FRPQNVAAVIVTATLPPFSRQGGQIDITVSAIGDAESLLGGTLVMTPLTAADGEIYAVAQGAVIAGGASAGGDGAEIIQG VPTAGVIPAGARVEREVEFDFASMSQIRLALRTPDFTTAARIEVAINTEFGRGVASMLDSGTVLLDISATRAPSPAHALT RVENILVVPETRARVVVDQRSGTIVMGEDVRISRVAVAQGNLTLRIQEEPIAVQPNPFAEGETVILPRTNAGLAEEAGTG LAELSGGTSLSEVVGALNALGVSPRDMIDILSSIEAAGALHAEFIVR >Mature_367_residues MIRIFSFFLVACIFATAAVATPIRIKDLVEFDGVRGNDLVGYGLIVGLNGTGDGLRNAPFTEEIMVNVLERLGVNVTGEQ FRPQNVAAVIVTATLPPFSRQGGQIDITVSAIGDAESLLGGTLVMTPLTAADGEIYAVAQGAVIAGGASAGGDGAEIIQG VPTAGVIPAGARVEREVEFDFASMSQIRLALRTPDFTTAARIEVAINTEFGRGVASMLDSGTVLLDISATRAPSPAHALT RVENILVVPETRARVVVDQRSGTIVMGEDVRISRVAVAQGNLTLRIQEEPIAVQPNPFAEGETVILPRTNAGLAEEAGTG LAELSGGTSLSEVVGALNALGVSPRDMIDILSSIEAAGALHAEFIVR
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=367, Percent_Identity=41.6893732970027, Blast_Score=238, Evalue=7e-64,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 38051; Mature: 38051
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIFSFFLVACIFATAAVATPIRIKDLVEFDGVRGNDLVGYGLIVGLNGTGDGLRNAPF CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC TEEIMVNVLERLGVNVTGEQFRPQNVAAVIVTATLPPFSRQGGQIDITVSAIGDAESLLG HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHHC GTLVMTPLTAADGEIYAVAQGAVIAGGASAGGDGAEIIQGVPTAGVIPAGARVEREVEFD CEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECC FASMSQIRLALRTPDFTTAARIEVAINTEFGRGVASMLDSGTVLLDISATRAPSPAHALT HHHHCEEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHH RVENILVVPETRARVVVDQRSGTIVMGEDVRISRVAVAQGNLTLRIQEEPIAVQPNPFAE HHHEEEEECCCCEEEEEECCCCEEEECCCCEEEEEEEEECCEEEEEECCCEEECCCCCCC GETVILPRTNAGLAEEAGTGLAELSGGTSLSEVVGALNALGVSPRDMIDILSSIEAAGAL CCEEEEECCCCCCHHHHCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC HAEFIVR CEEEEEC >Mature Secondary Structure MIRIFSFFLVACIFATAAVATPIRIKDLVEFDGVRGNDLVGYGLIVGLNGTGDGLRNAPF CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC TEEIMVNVLERLGVNVTGEQFRPQNVAAVIVTATLPPFSRQGGQIDITVSAIGDAESLLG HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHHC GTLVMTPLTAADGEIYAVAQGAVIAGGASAGGDGAEIIQGVPTAGVIPAGARVEREVEFD CEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECC FASMSQIRLALRTPDFTTAARIEVAINTEFGRGVASMLDSGTVLLDISATRAPSPAHALT HHHHCEEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHH RVENILVVPETRARVVVDQRSGTIVMGEDVRISRVAVAQGNLTLRIQEEPIAVQPNPFAE HHHEEEEECCCCEEEEEECCCCEEEECCCCEEEEEEEEECCEEEEEECCCEEECCCCCCC GETVILPRTNAGLAEEAGTGLAELSGGTSLSEVVGALNALGVSPRDMIDILSSIEAAGAL CCEEEEECCCCCCHHHHCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC HAEFIVR CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA