| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056666
Identifier: 89056666
GI number: 89056666
Start: 4284396
End: 4285406
Strand: Direct
Name: 89056666
Synonym: Jann_4175
Alternate gene names: NA
Gene position: 4284396-4285406 (Clockwise)
Preceding gene: 89056665
Following gene: 89056667
Centisome position: 99.22
GC content: 59.64
Gene sequence:
>1011_bases ATGAGTATTGCCACCTATTCCGACGCAGCGCAGTTCCAACTCCTTCGGCGCGACGCCACGCAGCATCGTGCCGATCTCGC GCGTCTAACATCGGAGCTATCGTCGGGCCGGGTCGCGGACCTTGGACAGGCTCTCCAGGGGGACTACTCCACCCTCTCGG ACATAACGCGCAGCTTGCGCCTGAATACGACTTTCATCACGTCCGTGTCCGAGGCTGCAATTGCTGTCGGCGTCCGTCAA AGTGCCCTCGAAAGAGTAGCGTCCGAGCTGGAAGGTTACGGATCCTCTCTTCTGGCTGTGACGGGTGCAGGTAGTTTGTC GGATATTCAACTCAAATTGGCAGATGCCCCAGCGCGTTTCGACCAAGCCGTGGATAGCCTAAACACACGCCTCGCCGGTC GCAGCCTCTTTTCCGCCGACGATCCGAATGCAACACCACTTATCAGCTCAGAAGATATGTTGGCTGAACTCAGAACGGTT GCCGCCGGTGCGCTCGACGCCGCCACTGCGGTGGCCGACGTCACAGCTTGGTTCATGGATACTGGCGGAGGGTATGAGAC ACTGGCCTGGCAAGGCGGTACGGGCGATCCGCCTCCTGTCCTGATAGGCGAGGGTCAATCAGCTGAAACCGGTGTCACGG CTTTGAACCCCGCCATCCGCGAAACTTTGGCCAGCCTTGCACTGGCAGTTCTCGCGTCAGAAGAGGTACCAGCCTCTGCG GAGCAAGAGAAACGCGCATTCGTCGCGTCCGCCGCCGAACAAGTGCTGCGTGCCGAGAGCAATTTGATTGGCCTCCGCGC GCGTCTCGGCACTGAAGAAGCACGCGTTGAAGACGCAAGGGTCACCGCCGAAGCGACCCGTGCCAGCTTGCAAATCGAGT ACGGACGGTTGGTTGAAGCTGATCCCTACGACACGGCAACGGAATTGGAGGCTATCTCTCTCCGTCTCGAAAGCCTGTAT ATTGTGACCGCGCGCGTCTCGCGCTTGAGCTTGACGGAGTACCTCAGGTGA
Upstream 100 bases:
>100_bases AGCTGCAACGCCTTTTGCAGATTGAGCAGATGTATGCCGCCAACGCACGTGTGATCAACGTGGCCGGGCAAATGATGGAT GAACTTCTGAGGATTGCAGG
Downstream 100 bases:
>100_bases TCCGGATATTCTCATTTTTCCTCGTGGCTTGCATTTTCGCGACCGCAGCTGTCGCAACTCCAATCCGGATAAAGGATTTG GTGGAGTTCGATGGTGTGCG
Product: flagellar hook-associated protein FlgL family protein
Products: NA
Alternate protein names: Flagellar Hook-Associated Protein; Flagellar Hook-Associated Protein FlgL; Flagellin And Related Hook-Associated Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQ SALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTV AAGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLY IVTARVSRLSLTEYLR
Sequences:
>Translated_336_residues MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQ SALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTV AAGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLY IVTARVSRLSLTEYLR >Mature_335_residues SIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLRLNTTFITSVSEAAIAVGVRQS ALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARFDQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVA AGALDAATAVADVTAWFMDTGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASAE QEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEADPYDTATELEAISLRLESLYI VTARVSRLSLTEYLR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35496; Mature: 35365
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH LNTTFITSVSEAAIAVGVRQSALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHH DQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVAAGALDAATAVADVTAWFMD HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCH EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEA HHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEC DPYDTATELEAISLRLESLYIVTARVSRLSLTEYLR CCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCC >Mature Secondary Structure SIATYSDAAQFQLLRRDATQHRADLARLTSELSSGRVADLGQALQGDYSTLSDITRSLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH LNTTFITSVSEAAIAVGVRQSALERVASELEGYGSSLLAVTGAGSLSDIQLKLADAPARF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHH DQAVDSLNTRLAGRSLFSADDPNATPLISSEDMLAELRTVAAGALDAATAVADVTAWFMD HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGGGYETLAWQGGTGDPPPVLIGEGQSAETGVTALNPAIRETLASLALAVLASEEVPASA CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCH EQEKRAFVASAAEQVLRAESNLIGLRARLGTEEARVEDARVTAEATRASLQIEYGRLVEA HHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEC DPYDTATELEAISLRLESLYIVTARVSRLSLTEYLR CCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA