| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056649
Identifier: 89056649
GI number: 89056649
Start: 4269929
End: 4270279
Strand: Direct
Name: 89056649
Synonym: Jann_4158
Alternate gene names: NA
Gene position: 4269929-4270279 (Clockwise)
Preceding gene: 89056647
Following gene: 89056650
Centisome position: 98.89
GC content: 60.4
Gene sequence:
>351_bases ATGGCCGTCAAGCGTTTGCTGACTGAATTTGGCATGGGCAGCTCACTGCGCCGCCAGGACTATACAGAAGCCGCGACGCG GGCCGTGAAGGACGCTTTGTGGCACAACTCGATCAATCTTGCGGAGCTCTTCGGCAAGCAGAAGGAAGAGATGCAGATCA CGGTGGAGGTCGGCGTGCAGAACCCCGACGCGCTGGACACTGACAAGATCGCAGCGATCTTTCCCTATGGTCAGGTGACC GTCGTGCCGCGAAATGGCGGGCTCGATGTGCCGCGCACCGACGGCGGCAATCCGACGGTTATTGCCAATGTTGCCATCTC GGTGGCCCTCGACCTGGAGCACGCACAATGA
Upstream 100 bases:
>100_bases AACAGTTAACACGTGGCCAAACGGGAATGTGACTGCGGCATTGCAGGACCGCGCACCTTGCCGCACATAAGATTGGACTG ATTATCGGAGGGATAGGGCA
Downstream 100 bases:
>100_bases GCGACCAGAGGTTCATCATCGAAATGGGCATGGGCAATGACCAATACGGCCAAGACTATACCAAGGCCGCAGCCCGCGCG ATTGAGGACGCTATCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVT VVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ
Sequences:
>Translated_116_residues MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVT VVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ >Mature_115_residues AVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQNPDALDTDKIAAIFPYGQVTV VPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12576; Mature: 12445
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQ CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCC NPDALDTDKIAAIFPYGQVTVVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC >Mature Secondary Structure AVKRLLTEFGMGSSLRRQDYTEAATRAVKDALWHNSINLAELFGKQKEEMQITVEVGVQ CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCC NPDALDTDKIAAIFPYGQVTVVPRNGGLDVPRTDGGNPTVIANVAISVALDLEHAQ CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA