| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056585
Identifier: 89056585
GI number: 89056585
Start: 4201668
End: 4202405
Strand: Direct
Name: 89056585
Synonym: Jann_4094
Alternate gene names: NA
Gene position: 4201668-4202405 (Clockwise)
Preceding gene: 89056584
Following gene: 89056586
Centisome position: 97.31
GC content: 57.05
Gene sequence:
>738_bases ATGAAACTGACCTCTGTTGCGGCTATCGCCGTACTGACATTTACCACCGCCGGTCATGCCCAAGACACCTTTACGGGCTT TTACGTGGGTGTTGGGGCGGACACTGGACTGCACCAGGAAACATCCAGCAATCTGTCGGCCAGGGTGAACGGGGCCGATG TCCTCGACCCGCACGCCACCGGCGCGACAAACCTGTTCGCCGGCTACACCACGGATCTGGGAATTTGGGTCGTTGGCGGT GAGGCTGAACTTTCCCTTTTCTCGATCGATTTCTCGGAAGCCGATTGCAGGCCTCCTCTTTGCGCGGACGCCTACATTAT CGGCACGAGGGACAACGCAATCCGGGTACGCGCCATCGCAGGTCAGGCCTTGACCGAAGATACTCTCCTGTTCGCAACTG CTGGTTTGACTGCATCTCAATACACCTATCGCGGCGTTCGTGCGGTCACCAATCTCGGGATGGGGCTAGGAGGTGCATCA AATACCGGGCCAGAAGAAACGGGCATGGCGTATGGTTTCAATATCGGTGTGGGGGCAGAACACCGTGTGACCGAGAGATT TTCATTTCGGGGCGACGTGTCGTTTGAGCGTGTCTACGTAACAGGCGTCACACCTCAATTGGCCGGTAGCAGCGGCAGCG TTGCGGGCAATACCGTTGCCGCCCGCGCCTTTCTGACAGACGGCTCATACCAAATGGAAAGTGTTCGCTTCGGTGTCAGT GCAGTTTTTCGTTTCTAA
Upstream 100 bases:
>100_bases ATTTTTTGCACGGAAGAACCTGAACTGACCCCAGAAGCAAACTCGTTCTGGCATTCACACCAATCGCAAATTTTGTTCCC GAATTCCCTAGGATAGTAGT
Downstream 100 bases:
>100_bases ACTGGGTCGTCGCATTCCCCATATGCATAACAGGTCGCTCCGACAGACGCGTCCATGTGATGTGTTCTTCCGCGATCCTC CACCAATTCGCGCGCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKLTSVAAIAVLTFTTAGHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVGG EAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTASQYTYRGVRAVTNLGMGLGGAS NTGPEETGMAYGFNIGVGAEHRVTERFSFRGDVSFERVYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS AVFRF
Sequences:
>Translated_245_residues MKLTSVAAIAVLTFTTAGHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVGG EAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTASQYTYRGVRAVTNLGMGLGGAS NTGPEETGMAYGFNIGVGAEHRVTERFSFRGDVSFERVYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS AVFRF >Mature_245_residues MKLTSVAAIAVLTFTTAGHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVGG EAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTASQYTYRGVRAVTNLGMGLGGAS NTGPEETGMAYGFNIGVGAEHRVTERFSFRGDVSFERVYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS AVFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25556; Mature: 25556
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTSVAAIAVLTFTTAGHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHAT CCCHHHEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCEECCCCC GATNLFAGYTTDLGIWVVGGEAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIA CCCEEEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEE GQALTEDTLLFATAGLTASQYTYRGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC HRVTERFSFRGDVSFERVYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS CCHHEEEECCCCCEEEEEEEEECCHHHCCCCCCCCCCEEEEEEEEECCCCEEHHHEECCE AVFRF EEECC >Mature Secondary Structure MKLTSVAAIAVLTFTTAGHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHAT CCCHHHEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCEECCCCC GATNLFAGYTTDLGIWVVGGEAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIA CCCEEEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEE GQALTEDTLLFATAGLTASQYTYRGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC HRVTERFSFRGDVSFERVYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS CCHHEEEECCCCCEEEEEEEEECCHHHCCCCCCCCCCEEEEEEEEECCCCEEHHHEECCE AVFRF EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA