Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056586

Identifier: 89056586

GI number: 89056586

Start: 4202628

End: 4203899

Strand: Direct

Name: 89056586

Synonym: Jann_4095

Alternate gene names: NA

Gene position: 4202628-4203899 (Clockwise)

Preceding gene: 89056585

Following gene: 89056597

Centisome position: 97.33

GC content: 57.47

Gene sequence:

>1272_bases
ATGTCCAAAACAGCTATTGCCATTATTGTTGGGATATTGGCGTCAAACGCCTCGGCGCAGACGATTTTGCTGCCTGACGA
TGGGCAAAGGATCGTTGGATCCGGCAATTTCGTGGGTGAAGGCACAGAACACTCGGGGGCCTTTTCCAGCGGCTACTTCG
GCGTATTGAACCAAAGCGCCGACCGGGCCTTGATGTTCGATGTTGGGCTTAGCATGGATTGGTCGGACGGGTGGAACCGC
ACATCCGGCACCCTCTACGCCGGGATCATCCATCGTTCGATGTTGGGAAATGGCGCGGTTCTGGGCTTCAACGCCTACGT
TGATGCGGGCCTTCTGAACAGTGAGATCGCAGGCCTTGTGTCAGCTGGCGTCGAATATCACCCCGCTCTCGGTGGCGATG
TGGAACTACTTTTCGCGGGCAATCTTTATCACGCTTTCGAGGATTATACCGACACCGGGGCGTTCGGCGCGGCGGCGACG
ATCCCCCGCAGCGGCGCGGATGCGTTCGTTACAGTGGACTACACTTTGGGTGACGGCCTGAGTCTGACCGGCACTGGCGG
CATATTCGGATATGTCGGAACCGATTTTGCGCAAGAGCTGATCGGGGCACGGATGGACTTCGGGGCGCGTTATATGCTGA
ATCCTCAGACGATCATTTCCGGTAGTGTTGGGGCGCGGGTTGCGGACGGGCGTGACACGGAACTCGTTGCAAGCCTCGGC
CTTCAAATTGCGCTTGGGGGTGGGTCAGGTGGCGCCATGTCGACCATGTCATCCTCCGGCATCGTCGACCCGCCCGAAGA
ACGACAGGCCGTCATAAGGGCCGCCAGACCAAATGGGGTTCTCGTTGCACCCCCAACGCGGCACTTCGGATATGGGACGC
CCTTCACACCGGTCGAGTCCACCGGAGGAGGCAATACACCGCAGCCCACAGCCCTCCTGGCCTGCCAAGCCATTATTATT
CCAGGTCCTGAGGGGACTGGAACACTTGCGGCTCAAGCCTGTTCCATTGATGGCAATGCTGGAATTCCATTGGGATCAAG
CGCACAGGTCTCGGCGGGTGTCCCGATAGAAATCGTATTTCCAGAATTTGAGGCCCCTTCCCTAACGATGGGAGAGGTGG
CCGATTTCATATGTGTCGATGGCAGCAATATGAACGCAGCCGTGGCATTCAGCGTGACCAGCACATCTCCGAGTAACTCG
TCGATTACACTTGTCGCCGAGAGTGGCACGGATGTGCTTTGCACCGTCTCTTTCAGAAATGTCGGAATTTAA

Upstream 100 bases:

>100_bases
ATCTGGCAGGTAATCGGATGCCTTTGTGGTCGGCCCCAAACAGCCAGTCAGAGGCTTGCCCGAATTGCCAATCAGAACAG
TCCCGTTGGAGAGCCAACTA

Downstream 100 bases:

>100_bases
ACGCGGCTGACCGTCTTAAACGGTCCAGAGAAGTGCGGAACTGCACATCTTCTTGTTGGAAGCGGTGAATGGGGGCGTAG
GTTTAGTCAGGTTGGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSKTAIAIIVGILASNASAQTILLPDDGQRIVGSGNFVGEGTEHSGAFSSGYFGVLNQSADRALMFDVGLSMDWSDGWNR
TSGTLYAGIIHRSMLGNGAVLGFNAYVDAGLLNSEIAGLVSAGVEYHPALGGDVELLFAGNLYHAFEDYTDTGAFGAAAT
IPRSGADAFVTVDYTLGDGLSLTGTGGIFGYVGTDFAQELIGARMDFGARYMLNPQTIISGSVGARVADGRDTELVASLG
LQIALGGGSGGAMSTMSSSGIVDPPEERQAVIRAARPNGVLVAPPTRHFGYGTPFTPVESTGGGNTPQPTALLACQAIII
PGPEGTGTLAAQACSIDGNAGIPLGSSAQVSAGVPIEIVFPEFEAPSLTMGEVADFICVDGSNMNAAVAFSVTSTSPSNS
SITLVAESGTDVLCTVSFRNVGI

Sequences:

>Translated_423_residues
MSKTAIAIIVGILASNASAQTILLPDDGQRIVGSGNFVGEGTEHSGAFSSGYFGVLNQSADRALMFDVGLSMDWSDGWNR
TSGTLYAGIIHRSMLGNGAVLGFNAYVDAGLLNSEIAGLVSAGVEYHPALGGDVELLFAGNLYHAFEDYTDTGAFGAAAT
IPRSGADAFVTVDYTLGDGLSLTGTGGIFGYVGTDFAQELIGARMDFGARYMLNPQTIISGSVGARVADGRDTELVASLG
LQIALGGGSGGAMSTMSSSGIVDPPEERQAVIRAARPNGVLVAPPTRHFGYGTPFTPVESTGGGNTPQPTALLACQAIII
PGPEGTGTLAAQACSIDGNAGIPLGSSAQVSAGVPIEIVFPEFEAPSLTMGEVADFICVDGSNMNAAVAFSVTSTSPSNS
SITLVAESGTDVLCTVSFRNVGI
>Mature_422_residues
SKTAIAIIVGILASNASAQTILLPDDGQRIVGSGNFVGEGTEHSGAFSSGYFGVLNQSADRALMFDVGLSMDWSDGWNRT
SGTLYAGIIHRSMLGNGAVLGFNAYVDAGLLNSEIAGLVSAGVEYHPALGGDVELLFAGNLYHAFEDYTDTGAFGAAATI
PRSGADAFVTVDYTLGDGLSLTGTGGIFGYVGTDFAQELIGARMDFGARYMLNPQTIISGSVGARVADGRDTELVASLGL
QIALGGGSGGAMSTMSSSGIVDPPEERQAVIRAARPNGVLVAPPTRHFGYGTPFTPVESTGGGNTPQPTALLACQAIIIP
GPEGTGTLAAQACSIDGNAGIPLGSSAQVSAGVPIEIVFPEFEAPSLTMGEVADFICVDGSNMNAAVAFSVTSTSPSNSS
ITLVAESGTDVLCTVSFRNVGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42873; Mature: 42742

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTAIAIIVGILASNASAQTILLPDDGQRIVGSGNFVGEGTEHSGAFSSGYFGVLNQSA
CCCHHEEEEEEHHHCCCCCEEEEECCCCCEEEECCCEECCCCCCCCCCCCCEEEEECCCC
DRALMFDVGLSMDWSDGWNRTSGTLYAGIIHRSMLGNGAVLGFNAYVDAGLLNSEIAGLV
CEEEEEEECCEEECCCCCCCCCCEEEEEEHHHHHCCCCEEEEEEHEECCCCHHHHHHHHH
SAGVEYHPALGGDVELLFAGNLYHAFEDYTDTGAFGAAATIPRSGADAFVTVDYTLGDGL
HCCCEECCCCCCCEEEEEECCCHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCE
SLTGTGGIFGYVGTDFAQELIGARMDFGARYMLNPQTIISGSVGARVADGRDTELVASLG
EEEECCCEEECCCHHHHHHHHHHHCCCCCEEEECCHHEEECCCCCEEECCCCHHHHEECC
LQIALGGGSGGAMSTMSSSGIVDPPEERQAVIRAARPNGVLVAPPTRHFGYGTPFTPVES
EEEEEECCCCCCCEECCCCCCCCCCHHHHHHHEECCCCCEEECCCCHHCCCCCCCCCCCC
TGGGNTPQPTALLACQAIIIPGPEGTGTLAAQACSIDGNAGIPLGSSAQVSAGVPIEIVF
CCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
PEFEAPSLTMGEVADFICVDGSNMNAAVAFSVTSTSPSNSSITLVAESGTDVLCTVSFRN
CCCCCCCCCHHHCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECC
VGI
CCC
>Mature Secondary Structure 
SKTAIAIIVGILASNASAQTILLPDDGQRIVGSGNFVGEGTEHSGAFSSGYFGVLNQSA
CCHHEEEEEEHHHCCCCCEEEEECCCCCEEEECCCEECCCCCCCCCCCCCEEEEECCCC
DRALMFDVGLSMDWSDGWNRTSGTLYAGIIHRSMLGNGAVLGFNAYVDAGLLNSEIAGLV
CEEEEEEECCEEECCCCCCCCCCEEEEEEHHHHHCCCCEEEEEEHEECCCCHHHHHHHHH
SAGVEYHPALGGDVELLFAGNLYHAFEDYTDTGAFGAAATIPRSGADAFVTVDYTLGDGL
HCCCEECCCCCCCEEEEEECCCHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCE
SLTGTGGIFGYVGTDFAQELIGARMDFGARYMLNPQTIISGSVGARVADGRDTELVASLG
EEEECCCEEECCCHHHHHHHHHHHCCCCCEEEECCHHEEECCCCCEEECCCCHHHHEECC
LQIALGGGSGGAMSTMSSSGIVDPPEERQAVIRAARPNGVLVAPPTRHFGYGTPFTPVES
EEEEEECCCCCCCEECCCCCCCCCCHHHHHHHEECCCCCEEECCCCHHCCCCCCCCCCCC
TGGGNTPQPTALLACQAIIIPGPEGTGTLAAQACSIDGNAGIPLGSSAQVSAGVPIEIVF
CCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
PEFEAPSLTMGEVADFICVDGSNMNAAVAFSVTSTSPSNSSITLVAESGTDVLCTVSFRN
CCCCCCCCCHHHCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECC
VGI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA