| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yjeE [C]
Identifier: 89056553
GI number: 89056553
Start: 4167611
End: 4168141
Strand: Direct
Name: yjeE [C]
Synonym: Jann_4062
Alternate gene names: 89056553
Gene position: 4167611-4168141 (Clockwise)
Preceding gene: 89056552
Following gene: 89056554
Centisome position: 96.52
GC content: 68.55
Gene sequence:
>531_bases ATGACGCAGCCGATGATCCCCCTTCCCGAAACCGACGCGCCTGTCCTGCCCGATTGGGCCATGCGCGCGACGGCGCCCCT GCCAACGCCGGAGGCGACGGATGCCCTTGCGGCAGCGCTGGCGCGTGTGCTGCGCCCCGGCGATACGCTGCTGCTGTCCG GTGCGCTCGGGGCCGGGAAAACCCACCTCGCGCGTGCGCTGATCCGGGCGCATCTGGGCAACCCGGCGGAACCTGTTCCA AGCCCGACTTTCACGCTCGTCCAGACCTATGACGGCGACGACACTGCCCTTTGGCACGCGGATCTCTACCGCCTTGGCGA TATTGGAGAGGTTGATGAATTGGGCCTGGATGAGGCGATGGAACAGGCGATCTGCCTGATCGAATGGCCCGACCGTCTGG CCCCCGACTGGCCCGGGGCTGCGGTGCTTCTTCACCTGACCCGCCACGCCGATGACACGCGGACACTGGCCTTGCACGCC GCCGCCGACACCGCGCTTGCCACCCGCATCGCAGGCGTGCTGCGCCCATGA
Upstream 100 bases:
>100_bases ACATGGATGAGGGTGCGAAACGCCACGCGTAGCCCGTCTCTTGTGACCGGCGCACGCTTTCGATTCAAATCCACCGCGAA CCCGTTTAGGCTGCCGCTCA
Downstream 100 bases:
>100_bases GCATCGCACCGTTTCTGGAGGCGGCCGGGTGGGCTGAGGCCACCGCCACGCCGTTGGCAGGCGACGCCTCCTCCCGCCGC TACACCCGGCTGTCGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTQPMIPLPETDAPVLPDWAMRATAPLPTPEATDALAAALARVLRPGDTLLLSGALGAGKTHLARALIRAHLGNPAEPVP SPTFTLVQTYDGDDTALWHADLYRLGDIGEVDELGLDEAMEQAICLIEWPDRLAPDWPGAAVLLHLTRHADDTRTLALHA AADTALATRIAGVLRP
Sequences:
>Translated_176_residues MTQPMIPLPETDAPVLPDWAMRATAPLPTPEATDALAAALARVLRPGDTLLLSGALGAGKTHLARALIRAHLGNPAEPVP SPTFTLVQTYDGDDTALWHADLYRLGDIGEVDELGLDEAMEQAICLIEWPDRLAPDWPGAAVLLHLTRHADDTRTLALHA AADTALATRIAGVLRP >Mature_175_residues TQPMIPLPETDAPVLPDWAMRATAPLPTPEATDALAAALARVLRPGDTLLLSGALGAGKTHLARALIRAHLGNPAEPVPS PTFTLVQTYDGDDTALWHADLYRLGDIGEVDELGLDEAMEQAICLIEWPDRLAPDWPGAAVLLHLTRHADDTRTLALHAA ADTALATRIAGVLRP
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=157, Percent_Identity=37.5796178343949, Blast_Score=87, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 18722; Mature: 18590
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPMIPLPETDAPVLPDWAMRATAPLPTPEATDALAAALARVLRPGDTLLLSGALGAGK CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCH THLARALIRAHLGNPAEPVPSPTFTLVQTYDGDDTALWHADLYRLGDIGEVDELGLDEAM HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHCCCCCCHHHCCHHHHH EQAICLIEWPDRLAPDWPGAAVLLHLTRHADDTRTLALHAAADTALATRIAGVLRP HHHEEEEECCHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQPMIPLPETDAPVLPDWAMRATAPLPTPEATDALAAALARVLRPGDTLLLSGALGAGK CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCH THLARALIRAHLGNPAEPVPSPTFTLVQTYDGDDTALWHADLYRLGDIGEVDELGLDEAM HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHCCCCCCHHHCCHHHHH EQAICLIEWPDRLAPDWPGAAVLLHLTRHADDTRTLALHAAADTALATRIAGVLRP HHHEEEEECCHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]