| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is divL [H]
Identifier: 89056552
GI number: 89056552
Start: 4165893
End: 4167542
Strand: Direct
Name: divL [H]
Synonym: Jann_4061
Alternate gene names: 89056552
Gene position: 4165893-4167542 (Clockwise)
Preceding gene: 89056551
Following gene: 89056553
Centisome position: 96.48
GC content: 65.94
Gene sequence:
>1650_bases TTGGACAACGCCACGACGCTGATCTTCATCGCGATCACCTTTGCAACCGCGGCCCTGGCGGTTCTTTTGACGACGCGCCT CCTCTCCAACCGAACCGCTCCGTCCATGGCCTCCGCGCAGGCCTCTGGCCGTGGCAGCGGCACCGACGTGTTGCGCCGTT ATCAGTTTCGGGAGGGGTATCTGCTCTCCGATGTGGATATGGACGACGCGTTTCTGGAGGCTGGCGTGGATCGCACCGTC GCCTTCCGGCGCCTCGTCTCGGCCCTGACACCGTTGAGCCCTGAACTGACCAAGCGCCTTGCGGGATTGCGCGATCGCGG CGATGCGTTTCTGGTGGACGGGCGCATCGGCTCTGACCCGGTCTTTATCGCCGGTCGGATCGAGGAGGAGGATGTTCTGA CCCTCTCCGTCGGGCCGGCGGGGGATGGCGCGGGGCGTCAGACGGTGGAAACCGCCACGCTCAACGCCCTTCAGACGGAA CTTCTGGATCTGCGCGCCGCCCTGGATTGCGGCGTCGTCCCGATGTGGCGTGAAGACGACCAGGGCCATGTGACCTGGGC CAACGCCCCATATTTTGAGCTGGTGGAGCGCCTGCGCGGAGGCCAGGCCGCCGGGTGGCCCCTGCCAAGGATTTTCGCCG CAGGACTCGATCAGATCCCGACCGAGGGGACGATCAGCCGCTGCAAGCTGGAGATGCCCGACCGGGACGAGCCGACGTGG TACGAGGTCAGCCGCGATCACCTGCCCGGTGGTCTGTCGCTGTTTACCGCCCAGCCCGCCGACCGCTTGGTGCGCGCCGA AACCGGCCTGCGGGAGTTTCTGCAAACCACCACCAAGACCTTCGCCGCCCTGCCCGTGGGCCTTGCCGTCTTTGACCGCA AGCGCCAGTTGGTGACGTTCAATCCCGCCCTTGTTGCGCTGACCCAGGCGGGCGCGCAATTTCTGTCGCAGCGCCCCGAC CTGCGCTCCTTCCTGGACCAGTTGCGCGAGAAGAAGCGCATGCCTGAGCCGCGCGATTACCTCAGCTGGCGCAATGAGAT CGCGCAGTTGGAAGAAGGCGCGGAGAACGGCACCTATCGCCAGCTTTGGGAATTGCCCGAGGGCAAGACCTTCCGCGTCA TGGGCCGCCCCCACCCCGACGGCGCGATTGCCTTCATGTTCGAGGATATCAGCGCCGAGGTCTCCCTCACCCGCCAGTTC CGCGCGGATCTGGAGATGTTTCAGGCCGTACTGGATGCTGTGCCCGCCGCCATTGCCGTGTTCCAGGCCGACGGCGCGAT GATCGGCGCGAATGAGGGATATGGTCAGCTTTGGGGGCAGGATCCGCAAGTGCTCGCGCAGATGCCGCACCTCAGCCAGG CCTGTACCGATTGGGCCGAGGGCTGCAAACCCAGCCAGGTGTGGAGCGAAATCCGGCAATTCGTCGGCCACGAGGTCGAC CGCGCGCCCTGGGTGCAGGAGATTGAGACCAAGGATGGATTGCGACTTGCCGTGCGCATGGCGGCGACGCGGGGGCGGGC CACGGTCATCCAATTCCTGCCGCTTGATGTCAGCCTGTCCGACCCGCTCGCAGATTTCGGGGCCGCCGCAACGCCGCTTC TGGATGCCGCTCGCGCCCACATGGATGAGGGTGCGAAACGCCACGCGTAG
Upstream 100 bases:
>100_bases CTTTCGAAACAGTTGCGATGGGGGCGCGTGCCAACGTTAACCAACTGTTAACCCTTCTGCGGCATTGTGTCCGGCGGGGC AGAAAAACAGGGTATGGGTC
Downstream 100 bases:
>100_bases CCCGTCTCTTGTGACCGGCGCACGCTTTCGATTCAAATCCACCGCGAACCCGTTTAGGCTGCCGCTCAATGACGCAGCCG ATGATCCCCCTTCCCGAAAC
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MDNATTLIFIAITFATAALAVLLTTRLLSNRTAPSMASAQASGRGSGTDVLRRYQFREGYLLSDVDMDDAFLEAGVDRTV AFRRLVSALTPLSPELTKRLAGLRDRGDAFLVDGRIGSDPVFIAGRIEEEDVLTLSVGPAGDGAGRQTVETATLNALQTE LLDLRAALDCGVVPMWREDDQGHVTWANAPYFELVERLRGGQAAGWPLPRIFAAGLDQIPTEGTISRCKLEMPDRDEPTW YEVSRDHLPGGLSLFTAQPADRLVRAETGLREFLQTTTKTFAALPVGLAVFDRKRQLVTFNPALVALTQAGAQFLSQRPD LRSFLDQLREKKRMPEPRDYLSWRNEIAQLEEGAENGTYRQLWELPEGKTFRVMGRPHPDGAIAFMFEDISAEVSLTRQF RADLEMFQAVLDAVPAAIAVFQADGAMIGANEGYGQLWGQDPQVLAQMPHLSQACTDWAEGCKPSQVWSEIRQFVGHEVD RAPWVQEIETKDGLRLAVRMAATRGRATVIQFLPLDVSLSDPLADFGAAATPLLDAARAHMDEGAKRHA
Sequences:
>Translated_549_residues MDNATTLIFIAITFATAALAVLLTTRLLSNRTAPSMASAQASGRGSGTDVLRRYQFREGYLLSDVDMDDAFLEAGVDRTV AFRRLVSALTPLSPELTKRLAGLRDRGDAFLVDGRIGSDPVFIAGRIEEEDVLTLSVGPAGDGAGRQTVETATLNALQTE LLDLRAALDCGVVPMWREDDQGHVTWANAPYFELVERLRGGQAAGWPLPRIFAAGLDQIPTEGTISRCKLEMPDRDEPTW YEVSRDHLPGGLSLFTAQPADRLVRAETGLREFLQTTTKTFAALPVGLAVFDRKRQLVTFNPALVALTQAGAQFLSQRPD LRSFLDQLREKKRMPEPRDYLSWRNEIAQLEEGAENGTYRQLWELPEGKTFRVMGRPHPDGAIAFMFEDISAEVSLTRQF RADLEMFQAVLDAVPAAIAVFQADGAMIGANEGYGQLWGQDPQVLAQMPHLSQACTDWAEGCKPSQVWSEIRQFVGHEVD RAPWVQEIETKDGLRLAVRMAATRGRATVIQFLPLDVSLSDPLADFGAAATPLLDAARAHMDEGAKRHA >Mature_549_residues MDNATTLIFIAITFATAALAVLLTTRLLSNRTAPSMASAQASGRGSGTDVLRRYQFREGYLLSDVDMDDAFLEAGVDRTV AFRRLVSALTPLSPELTKRLAGLRDRGDAFLVDGRIGSDPVFIAGRIEEEDVLTLSVGPAGDGAGRQTVETATLNALQTE LLDLRAALDCGVVPMWREDDQGHVTWANAPYFELVERLRGGQAAGWPLPRIFAAGLDQIPTEGTISRCKLEMPDRDEPTW YEVSRDHLPGGLSLFTAQPADRLVRAETGLREFLQTTTKTFAALPVGLAVFDRKRQLVTFNPALVALTQAGAQFLSQRPD LRSFLDQLREKKRMPEPRDYLSWRNEIAQLEEGAENGTYRQLWELPEGKTFRVMGRPHPDGAIAFMFEDISAEVSLTRQF RADLEMFQAVLDAVPAAIAVFQADGAMIGANEGYGQLWGQDPQVLAQMPHLSQACTDWAEGCKPSQVWSEIRQFVGHEVD RAPWVQEIETKDGLRLAVRMAATRGRATVIQFLPLDVSLSDPLADFGAAATPLLDAARAHMDEGAKRHA
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60377; Mature: 60377
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00047 HISTONE_H4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNATTLIFIAITFATAALAVLLTTRLLSNRTAPSMASAQASGRGSGTDVLRRYQFREGY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCC LLSDVDMDDAFLEAGVDRTVAFRRLVSALTPLSPELTKRLAGLRDRGDAFLVDGRIGSDP EEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC VFIAGRIEEEDVLTLSVGPAGDGAGRQTVETATLNALQTELLDLRAALDCGVVPMWREDD EEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QGHVTWANAPYFELVERLRGGQAAGWPLPRIFAAGLDQIPTEGTISRCKLEMPDRDEPTW CCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHCHHCCCCCCCHHHEEECCCCCCCCCC YEVSRDHLPGGLSLFTAQPADRLVRAETGLREFLQTTTKTFAALPVGLAVFDRKRQLVTF EECCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPALVALTQAGAQFLSQRPDLRSFLDQLREKKRMPEPRDYLSWRNEIAQLEEGAENGTYR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHH QLWELPEGKTFRVMGRPHPDGAIAFMFEDISAEVSLTRQFRADLEMFQAVLDAVPAAIAV HHHCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FQADGAMIGANEGYGQLWGQDPQVLAQMPHLSQACTDWAEGCKPSQVWSEIRQFVGHEVD EECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC RAPWVQEIETKDGLRLAVRMAATRGRATVIQFLPLDVSLSDPLADFGAAATPLLDAARAH CCCCHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHH MDEGAKRHA HHCCHHCCC >Mature Secondary Structure MDNATTLIFIAITFATAALAVLLTTRLLSNRTAPSMASAQASGRGSGTDVLRRYQFREGY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCC LLSDVDMDDAFLEAGVDRTVAFRRLVSALTPLSPELTKRLAGLRDRGDAFLVDGRIGSDP EEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC VFIAGRIEEEDVLTLSVGPAGDGAGRQTVETATLNALQTELLDLRAALDCGVVPMWREDD EEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QGHVTWANAPYFELVERLRGGQAAGWPLPRIFAAGLDQIPTEGTISRCKLEMPDRDEPTW CCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHCHHCCCCCCCHHHEEECCCCCCCCCC YEVSRDHLPGGLSLFTAQPADRLVRAETGLREFLQTTTKTFAALPVGLAVFDRKRQLVTF EECCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPALVALTQAGAQFLSQRPDLRSFLDQLREKKRMPEPRDYLSWRNEIAQLEEGAENGTYR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHH QLWELPEGKTFRVMGRPHPDGAIAFMFEDISAEVSLTRQFRADLEMFQAVLDAVPAAIAV HHHCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FQADGAMIGANEGYGQLWGQDPQVLAQMPHLSQACTDWAEGCKPSQVWSEIRQFVGHEVD EECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC RAPWVQEIETKDGLRLAVRMAATRGRATVIQFLPLDVSLSDPLADFGAAATPLLDAARAH CCCCHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHH MDEGAKRHA HHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]