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The map label for this gene is regB [H]

Identifier: 89056551

GI number: 89056551

Start: 4164349

End: 4165773

Strand: Direct

Name: regB [H]

Synonym: Jann_4060

Alternate gene names: 89056551

Gene position: 4164349-4165773 (Clockwise)

Preceding gene: 89056549

Following gene: 89056552

Centisome position: 96.44

GC content: 64.56

Gene sequence:

>1425_bases
ATGGCTGTTGTTGACCAGGCCAAAGACCCTGCATTGATGCTGGTCCAGCAAGACAGTCGTGTGGATTGGGTGCGGCTGCG
CACGCTTCTGGTCCTGCGCTGGATGGCGATCTTCGGGCAAACCGTGGCCGTTGTGACGGCAACCTTCTATCTGGGCCTGC
GGGTGGAGCTTGGGTTGTGCTTTCTCGCCATCGGCGCGTCGGTCGTGTCCAACCTCGTGGCGCTCTATATTTTTCCCGAA
AACCAGCGCCTGAGCGACCGGGACGCAATGCTGACGCTGCTGTTTGACCTGTCGCAATTGTCGTTTTTGCTGTTCCTCAC
CGGGGGGCTCAACAACCCGTTCACGCTGCTGATCCTTGCGCCGGTCACGATCTCGGCCACCGCATTGACGATGCGGTCCA
CCGTGATCCTGGGGGTGTTGGCGATCTTCCTGATCTCCTGCCTGTCGTTCTGGTATCTGCCGCTGACAACCCTGTCGGGC
GAGGTTTTGGCGCTGCCGGGCCTGTTCATCCTGGGCTTCTGGGTGTCGCTGGTGATCGGGATCCTGTTTCTGTCCGCCTA
TGCGCGCCGCGTGGCGTCCGAGACGCACCGAATGAGTCAGGCCTTGCTGGCCACGCAAATGGCCCTGGCGCGGGAGCAGA
AGTTGACCGATCTGGGCGGGGTGATTGCGGCAGCGGCCCATGAATTGGGCACGCCGCTCGCGACGATCAAGTTGACGGCG
ACCGAGCTTCTCGATGACCTCTCCGATCAGCCGACCCTGGCCGAGGACGTCTCGCTGATCCGCGATCAGGCTGACCGGTG
CGGCGATATCCTGCTATCCATGGGGCGGGCGGGAAAGGACGACATCCACCTGCGCAGCGCGCCGTTGGGGGCCGTGGTGC
AGGAGGCGGCTGAACCCCATGCCGGGCGCGGGATCGACATGCATTACGACTTCCACCCCGTCGACGGCATCGGTGATCTG
GACCCCAGCCAGCAACCCCTGATCTGGCGCAAGCCCGAGGTCATTCACGGCATCCGCAACCTGGTGCAGAACGCGGTCGA
TTTCGCGCAGGAGCAGGTCTGGGTGGAGGCCGATTGGGGCGACGGGTTCATCCGCGTCACCCTCACCGACGATGGTCCCG
GCTTCCCGCCGGATCTTCTGGGCCGTCTGGGGGACCCGTTCCTGCGCCGCCGCAACCGGGTCCATCAGGACCTGCGCCCG
GGCTATCAGGGCATGGGGCTGGGGTTGTTCATCGCCAAGACCCTGCTGGAACGCTCTGGCGCCAAGGTGCAGTTTCGCAA
CGTGGCCGATCCGTTCTTGACCCACGATGATACACGGGGCCGGTCCGGCGCCCGGGTGCAGGTGGTCTGGCCCGAGGCCT
CGATCCAACCGGCGGAGGCCCAGACCAGCGGCGCATTGGGCCCCAACATGCCGATCATCGACTGA

Upstream 100 bases:

>100_bases
TCAAAAAGCCTCACTCAAAAGCGGTGTCATCTCGTTGATTACCTAAGGTGTCCCGCCTAACAATTCACGAGCGCGTTAAT
GTGACAGGATGCCCCGCCCC

Downstream 100 bases:

>100_bases
TGTTCCCTGATTAGCCTGTCTTTCGAAACAGTTGCGATGGGGGCGCGTGCCAACGTTAACCAACTGTTAACCCTTCTGCG
GCATTGTGTCCGGCGGGGCA

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MAVVDQAKDPALMLVQQDSRVDWVRLRTLLVLRWMAIFGQTVAVVTATFYLGLRVELGLCFLAIGASVVSNLVALYIFPE
NQRLSDRDAMLTLLFDLSQLSFLLFLTGGLNNPFTLLILAPVTISATALTMRSTVILGVLAIFLISCLSFWYLPLTTLSG
EVLALPGLFILGFWVSLVIGILFLSAYARRVASETHRMSQALLATQMALAREQKLTDLGGVIAAAAHELGTPLATIKLTA
TELLDDLSDQPTLAEDVSLIRDQADRCGDILLSMGRAGKDDIHLRSAPLGAVVQEAAEPHAGRGIDMHYDFHPVDGIGDL
DPSQQPLIWRKPEVIHGIRNLVQNAVDFAQEQVWVEADWGDGFIRVTLTDDGPGFPPDLLGRLGDPFLRRRNRVHQDLRP
GYQGMGLGLFIAKTLLERSGAKVQFRNVADPFLTHDDTRGRSGARVQVVWPEASIQPAEAQTSGALGPNMPIID

Sequences:

>Translated_474_residues
MAVVDQAKDPALMLVQQDSRVDWVRLRTLLVLRWMAIFGQTVAVVTATFYLGLRVELGLCFLAIGASVVSNLVALYIFPE
NQRLSDRDAMLTLLFDLSQLSFLLFLTGGLNNPFTLLILAPVTISATALTMRSTVILGVLAIFLISCLSFWYLPLTTLSG
EVLALPGLFILGFWVSLVIGILFLSAYARRVASETHRMSQALLATQMALAREQKLTDLGGVIAAAAHELGTPLATIKLTA
TELLDDLSDQPTLAEDVSLIRDQADRCGDILLSMGRAGKDDIHLRSAPLGAVVQEAAEPHAGRGIDMHYDFHPVDGIGDL
DPSQQPLIWRKPEVIHGIRNLVQNAVDFAQEQVWVEADWGDGFIRVTLTDDGPGFPPDLLGRLGDPFLRRRNRVHQDLRP
GYQGMGLGLFIAKTLLERSGAKVQFRNVADPFLTHDDTRGRSGARVQVVWPEASIQPAEAQTSGALGPNMPIID
>Mature_473_residues
AVVDQAKDPALMLVQQDSRVDWVRLRTLLVLRWMAIFGQTVAVVTATFYLGLRVELGLCFLAIGASVVSNLVALYIFPEN
QRLSDRDAMLTLLFDLSQLSFLLFLTGGLNNPFTLLILAPVTISATALTMRSTVILGVLAIFLISCLSFWYLPLTTLSGE
VLALPGLFILGFWVSLVIGILFLSAYARRVASETHRMSQALLATQMALAREQKLTDLGGVIAAAAHELGTPLATIKLTAT
ELLDDLSDQPTLAEDVSLIRDQADRCGDILLSMGRAGKDDIHLRSAPLGAVVQEAAEPHAGRGIDMHYDFHPVDGIGDLD
PSQQPLIWRKPEVIHGIRNLVQNAVDFAQEQVWVEADWGDGFIRVTLTDDGPGFPPDLLGRLGDPFLRRRNRVHQDLRPG
YQGMGLGLFIAKTLLERSGAKVQFRNVADPFLTHDDTRGRSGARVQVVWPEASIQPAEAQTSGALGPNMPIID

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 51787; Mature: 51656

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVDQAKDPALMLVQQDSRVDWVRLRTLLVLRWMAIFGQTVAVVTATFYLGLRVELGLC
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FLAIGASVVSNLVALYIFPENQRLSDRDAMLTLLFDLSQLSFLLFLTGGLNNPFTLLILA
HHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
PVTISATALTMRSTVILGVLAIFLISCLSFWYLPLTTLSGEVLALPGLFILGFWVSLVIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILFLSAYARRVASETHRMSQALLATQMALAREQKLTDLGGVIAAAAHELGTPLATIKLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
TELLDDLSDQPTLAEDVSLIRDQADRCGDILLSMGRAGKDDIHLRSAPLGAVVQEAAEPH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCC
AGRGIDMHYDFHPVDGIGDLDPSQQPLIWRKPEVIHGIRNLVQNAVDFAQEQVWVEADWG
CCCCCEEEECCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
DGFIRVTLTDDGPGFPPDLLGRLGDPFLRRRNRVHQDLRPGYQGMGLGLFIAKTLLERSG
CCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
AKVQFRNVADPFLTHDDTRGRSGARVQVVWPEASIQPAEAQTSGALGPNMPIID
CEEEECCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVVDQAKDPALMLVQQDSRVDWVRLRTLLVLRWMAIFGQTVAVVTATFYLGLRVELGLC
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FLAIGASVVSNLVALYIFPENQRLSDRDAMLTLLFDLSQLSFLLFLTGGLNNPFTLLILA
HHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
PVTISATALTMRSTVILGVLAIFLISCLSFWYLPLTTLSGEVLALPGLFILGFWVSLVIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILFLSAYARRVASETHRMSQALLATQMALAREQKLTDLGGVIAAAAHELGTPLATIKLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
TELLDDLSDQPTLAEDVSLIRDQADRCGDILLSMGRAGKDDIHLRSAPLGAVVQEAAEPH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCC
AGRGIDMHYDFHPVDGIGDLDPSQQPLIWRKPEVIHGIRNLVQNAVDFAQEQVWVEADWG
CCCCCEEEECCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
DGFIRVTLTDDGPGFPPDLLGRLGDPFLRRRNRVHQDLRPGYQGMGLGLFIAKTLLERSG
CCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
AKVQFRNVADPFLTHDDTRGRSGARVQVVWPEASIQPAEAQTSGALGPNMPIID
CEEEECCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]