| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056506
Identifier: 89056506
GI number: 89056506
Start: 4119042
End: 4120094
Strand: Direct
Name: 89056506
Synonym: Jann_4015
Alternate gene names: NA
Gene position: 4119042-4120094 (Clockwise)
Preceding gene: 89056505
Following gene: 89056512
Centisome position: 95.39
GC content: 66.76
Gene sequence:
>1053_bases ATGCATCTCTGGATCCGAGCGGAAGAGCGCGCCAATGAACGGCGCGTGGGCATCACCCCCGTAGGCGTCTCACGTCTTTT GGCAAACGGGCTGGATATAACGGTCGAAGACAGCCCCATCCGCGTCATCCCCATCGACGGTTTCCGCCAGTCGGGCGCGC AGATCGCAGCCGCCGGGTCGTGGCGCAGCGCGCCGGAGGATGCGGTGATCTTTGGCCTGAAGGAACTGCCTGAGGACACC GGTCCTTTGCGCCACCGGCACATCCTGTTCGGTCACGCCTTCAAAGGTCAGGCCGACGGGGCCCATCTGCTGCGGCGTTT TCGGGACGGCGGCGGCGCGCTTTACGACCTCGAATATCTGGTGGACGAGACGGGCCGCCGCGTCGCCGCGTTCGGCTATT GGGCGGGCTTCGTCGGTGCGGCACTCAGCGTCGCGGCCTGGGCTGCACAGCACGCGGGCAGGACCCTGGACCCCGTGGCC CCCTGGCCCGATCAAACCGCCTTGATCGACGATGTTCAGACCCGCCTGACCGCAGCGCAGGCCCCCCTGCCCACCGTCTT GATCATTGGCGCCCTCGGCCGCACCGGAACCGGGGCAAGTGCCTTTCTAAATGCGCTTGGCATCCAGCCCACCGCATGGG ACATGGCCGAGACCGCCCATGGCGGGTCGTTCCCGCAGGTCCTGTCCCACACGATGTTCCTGAACTGCATTCTCGCTATG GACGGCGTGCCCGTCTTCGTGCCTGCGACAGCCAAAGACGCCCCGCGCGCGCTGCGGGTCATCGGCGATATCGCCTGCGA TCCCAGTTCGGATTTCTCGCCCATCAAGGTCTACGACCGGGTGACCACCTGGGCGGAGCCGACCCTGCGCGCCGCGGACG CTCCGCCGCTCGACGTCATGGCCATCGACAACCTGCCGTCACTGCTGCCGCTGGAAAGTTCCACGGATTTCGCCGAGCAG CTTTTGCCGCACCTGCTGGCCCTGCCGCAGATCGACGAAGGGGTCTGGGCACGCGCCCATGCCAGCTATCAACACGCCCT CGGGTCACTCTGA
Upstream 100 bases:
>100_bases ACGGGGCGGGCTATATCTTTCTGGGGGACGTGACTTGGTCGTAGGCGACGGCGGGTTTGCCTGCTAGCGTCGCCCCGGTC GTAGCCAGGCGGGAGCCCCC
Downstream 100 bases:
>100_bases CCCACCGGAGTATGCGGCGACCCGGCCCTAAAGCAAGTCGCCTTCCTGCCGGGCCACATCCAGATCCAGGGCTTCGGCCC CCGCCTCTAGATGATCTGCA
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Alanine Dehydrogenase/PNT Domain Protein; NAD(P) Transhydrogenase Subunit Alpha; Alanine Dehydrogenase/PNT Domain-Containing Protein; Oxidoreductase; Alanine Dehydrogenase/PNT N-Terminal Domain Family
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MHLWIRAEERANERRVGITPVGVSRLLANGLDITVEDSPIRVIPIDGFRQSGAQIAAAGSWRSAPEDAVIFGLKELPEDT GPLRHRHILFGHAFKGQADGAHLLRRFRDGGGALYDLEYLVDETGRRVAAFGYWAGFVGAALSVAAWAAQHAGRTLDPVA PWPDQTALIDDVQTRLTAAQAPLPTVLIIGALGRTGTGASAFLNALGIQPTAWDMAETAHGGSFPQVLSHTMFLNCILAM DGVPVFVPATAKDAPRALRVIGDIACDPSSDFSPIKVYDRVTTWAEPTLRAADAPPLDVMAIDNLPSLLPLESSTDFAEQ LLPHLLALPQIDEGVWARAHASYQHALGSL
Sequences:
>Translated_350_residues MHLWIRAEERANERRVGITPVGVSRLLANGLDITVEDSPIRVIPIDGFRQSGAQIAAAGSWRSAPEDAVIFGLKELPEDT GPLRHRHILFGHAFKGQADGAHLLRRFRDGGGALYDLEYLVDETGRRVAAFGYWAGFVGAALSVAAWAAQHAGRTLDPVA PWPDQTALIDDVQTRLTAAQAPLPTVLIIGALGRTGTGASAFLNALGIQPTAWDMAETAHGGSFPQVLSHTMFLNCILAM DGVPVFVPATAKDAPRALRVIGDIACDPSSDFSPIKVYDRVTTWAEPTLRAADAPPLDVMAIDNLPSLLPLESSTDFAEQ LLPHLLALPQIDEGVWARAHASYQHALGSL >Mature_350_residues MHLWIRAEERANERRVGITPVGVSRLLANGLDITVEDSPIRVIPIDGFRQSGAQIAAAGSWRSAPEDAVIFGLKELPEDT GPLRHRHILFGHAFKGQADGAHLLRRFRDGGGALYDLEYLVDETGRRVAAFGYWAGFVGAALSVAAWAAQHAGRTLDPVA PWPDQTALIDDVQTRLTAAQAPLPTVLIIGALGRTGTGASAFLNALGIQPTAWDMAETAHGGSFPQVLSHTMFLNCILAM DGVPVFVPATAKDAPRALRVIGDIACDPSSDFSPIKVYDRVTTWAEPTLRAADAPPLDVMAIDNLPSLLPLESSTDFAEQ LLPHLLALPQIDEGVWARAHASYQHALGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322225, Length=356, Percent_Identity=44.1011235955056, Blast_Score=270, Evalue=2e-73, Organism=Drosophila melanogaster, GI23397395, Length=405, Percent_Identity=23.7037037037037, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37487; Mature: 37487
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLWIRAEERANERRVGITPVGVSRLLANGLDITVEDSPIRVIPIDGFRQSGAQIAAAGS CEEEEECHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCEEEECCC WRSAPEDAVIFGLKELPEDTGPLRHRHILFGHAFKGQADGAHLLRRFRDGGGALYDLEYL CCCCCCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHH VDETGRRVAAFGYWAGFVGAALSVAAWAAQHAGRTLDPVAPWPDQTALIDDVQTRLTAAQ HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APLPTVLIIGALGRTGTGASAFLNALGIQPTAWDMAETAHGGSFPQVLSHTMFLNCILAM CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH DGVPVFVPATAKDAPRALRVIGDIACDPSSDFSPIKVYDRVTTWAEPTLRAADAPPLDVM CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCEEE AIDNLPSLLPLESSTDFAEQLLPHLLALPQIDEGVWARAHASYQHALGSL EECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHLWIRAEERANERRVGITPVGVSRLLANGLDITVEDSPIRVIPIDGFRQSGAQIAAAGS CEEEEECHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCEEEECCC WRSAPEDAVIFGLKELPEDTGPLRHRHILFGHAFKGQADGAHLLRRFRDGGGALYDLEYL CCCCCCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHH VDETGRRVAAFGYWAGFVGAALSVAAWAAQHAGRTLDPVAPWPDQTALIDDVQTRLTAAQ HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APLPTVLIIGALGRTGTGASAFLNALGIQPTAWDMAETAHGGSFPQVLSHTMFLNCILAM CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH DGVPVFVPATAKDAPRALRVIGDIACDPSSDFSPIKVYDRVTTWAEPTLRAADAPPLDVM CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCEEE AIDNLPSLLPLESSTDFAEQLLPHLLALPQIDEGVWARAHASYQHALGSL EECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA