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The map label for this gene is 89056475

Identifier: 89056475

GI number: 89056475

Start: 4089877

End: 4090383

Strand: Direct

Name: 89056475

Synonym: Jann_3984

Alternate gene names: NA

Gene position: 4089877-4090383 (Clockwise)

Preceding gene: 89056469

Following gene: 89056476

Centisome position: 94.72

GC content: 64.69

Gene sequence:

>507_bases
GTGACCAGACACCAACCGACAGAGAGAGACCTCATCATGCGTAGAACGCTTATTGCCCTTGCCGCCACCACGGCCCTCGC
CTCCCCTGCCTTTGCAGACGGCCATGCCATGAACATTGTCGAGACGGCGGCAGAGGCCGGTTCCTTCACCACGCTTCTGG
CCGCAGCCGAGGCCGCTGGCCTGGTTGAGACGCTGTCGGGTGAAGGCCCGCTGACCGTCTTCGCCCCCACCGATGAGGCC
TTCGCCGCCCTGCCCGAAGGCACGGTCGAGGGTCTGCTGGCAGACACCGACGCCCTGACCGCCGTGCTGACCTACCACGT
CGTCGCCGGTGCCGTGATGTCCGGCGATCTGACCGACGGCATGACCGCCGCAACGGTCAACGGAGCCGATATCACCGTGT
CGCTTGATCCGGTGATGATCAACGACGCCAACGTCGTGACCGCCGATATCGAGGCGTCGAACGGCGTCATCCACGTCATC
GACAGCGTGCTTCTGCCACCCATGTAA

Upstream 100 bases:

>100_bases
CCCCTCGGCGGAAATTCGCTTCAGTTGAAAAGACTTTTCCGCAAAGTAATTCGCCTCTCGTCAGCAGGCGGACCCCGTTG
ACCGCGGGATCCCAAGTTCC

Downstream 100 bases:

>100_bases
GCCGCGACTTTCGTCGGGGGCGACGCAACGTGGCCCCCGACGCTGATCGACACACCAATACCAACACAGGAGGACCCCAC
CATGGACCGTCGTCAATTCA

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTRHQPTERDLIMRRTLIALAATTALASPAFADGHAMNIVETAAEAGSFTTLLAAAEAAGLVETLSGEGPLTVFAPTDEA
FAALPEGTVEGLLADTDALTAVLTYHVVAGAVMSGDLTDGMTAATVNGADITVSLDPVMINDANVVTADIEASNGVIHVI
DSVLLPPM

Sequences:

>Translated_168_residues
MTRHQPTERDLIMRRTLIALAATTALASPAFADGHAMNIVETAAEAGSFTTLLAAAEAAGLVETLSGEGPLTVFAPTDEA
FAALPEGTVEGLLADTDALTAVLTYHVVAGAVMSGDLTDGMTAATVNGADITVSLDPVMINDANVVTADIEASNGVIHVI
DSVLLPPM
>Mature_167_residues
TRHQPTERDLIMRRTLIALAATTALASPAFADGHAMNIVETAAEAGSFTTLLAAAEAAGLVETLSGEGPLTVFAPTDEAF
AALPEGTVEGLLADTDALTAVLTYHVVAGAVMSGDLTDGMTAATVNGADITVSLDPVMINDANVVTADIEASNGVIHVID
SVLLPPM

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=122, Percent_Identity=43.4426229508197, Blast_Score=92, Evalue=2e-19,
Organism=Homo sapiens, GI209862911, Length=132, Percent_Identity=34.8484848484849, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI209863034, Length=132, Percent_Identity=34.8484848484849, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI209863011, Length=121, Percent_Identity=35.5371900826446, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI209862907, Length=121, Percent_Identity=35.5371900826446, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28574452, Length=124, Percent_Identity=33.8709677419355, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 17057; Mature: 16926

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHQPTERDLIMRRTLIALAATTALASPAFADGHAMNIVETAAEAGSFTTLLAAAEAAG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LVETLSGEGPLTVFAPTDEAFAALPEGTVEGLLADTDALTAVLTYHVVAGAVMSGDLTDG
HHHHHCCCCCEEEECCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
MTAATVNGADITVSLDPVMINDANVVTADIEASNGVIHVIDSVLLPPM
CEEEEECCCEEEEEECCEEECCCCEEEEEEECCCCEEEEEHHHHCCCC
>Mature Secondary Structure 
TRHQPTERDLIMRRTLIALAATTALASPAFADGHAMNIVETAAEAGSFTTLLAAAEAAG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LVETLSGEGPLTVFAPTDEAFAALPEGTVEGLLADTDALTAVLTYHVVAGAVMSGDLTDG
HHHHHCCCCCEEEECCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
MTAATVNGADITVSLDPVMINDANVVTADIEASNGVIHVIDSVLLPPM
CEEEEECCCEEEEEECCEEECCCCEEEEEEECCCCEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]