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The map label for this gene is 89056476

Identifier: 89056476

GI number: 89056476

Start: 4090465

End: 4090974

Strand: Direct

Name: 89056476

Synonym: Jann_3985

Alternate gene names: NA

Gene position: 4090465-4090974 (Clockwise)

Preceding gene: 89056475

Following gene: 89056477

Centisome position: 94.73

GC content: 64.12

Gene sequence:

>510_bases
ATGGACCGTCGTCAATTCATCACCCGCACCGCAGGCCTCGCCGTTGCAGCCCCCTTCACCGGACTGGCCGCATCGCCCGC
CCTGGCCGTCACCGGCAGCTCCAACATCGTGGAACTTGCCGCGGCAACACCTGATCTCTCCACGCTCGTGACCGCTGTTC
AGGCCGCAGGTCTTGTGGACACGCTGTCCTCGCGCGGCAACTTCACCGTGTTTGCGCCCACGAACCGCGCGTTTGCGCAT
TTGCCTGCTGGTACGCTTGATGCGCTGCTGGCCGACATCCCGGCCCTGACCAACGTGCTCACGTACCATGTCTCGCCCGA
CTATTATCCGGCCTCGCAATTCGTGGGTCAGTTCGGGGCCGTCCATCAGACGGTTCAAGGCCAGCCGATCCGCGTGGACG
GGCGCAGCGGCACCGTTCTCCTGAATGGCAACACCCGGGTGACGACGGCGGATGTCTTCGCCTCCAACGGCGTGGTTCAC
ATCATTGATGCGGTTCTGCTGCCCCATTGA

Upstream 100 bases:

>100_bases
GCTTCTGCCACCCATGTAAGCCGCGACTTTCGTCGGGGGCGACGCAACGTGGCCCCCGACGCTGATCGACACACCAATAC
CAACACAGGAGGACCCCACC

Downstream 100 bases:

>100_bases
TCGCAGGCAGGGTTGCAAGGTTGCAACCCACACCTAACCATCTGAACTAAAATCATAATCACGATATTGATTTTCAACGC
AACGCCCCGCCAGTCCCCCT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDRRQFITRTAGLAVAAPFTGLAASPALAVTGSSNIVELAAATPDLSTLVTAVQAAGLVDTLSSRGNFTVFAPTNRAFAH
LPAGTLDALLADIPALTNVLTYHVSPDYYPASQFVGQFGAVHQTVQGQPIRVDGRSGTVLLNGNTRVTTADVFASNGVVH
IIDAVLLPH

Sequences:

>Translated_169_residues
MDRRQFITRTAGLAVAAPFTGLAASPALAVTGSSNIVELAAATPDLSTLVTAVQAAGLVDTLSSRGNFTVFAPTNRAFAH
LPAGTLDALLADIPALTNVLTYHVSPDYYPASQFVGQFGAVHQTVQGQPIRVDGRSGTVLLNGNTRVTTADVFASNGVVH
IIDAVLLPH
>Mature_169_residues
MDRRQFITRTAGLAVAAPFTGLAASPALAVTGSSNIVELAAATPDLSTLVTAVQAAGLVDTLSSRGNFTVFAPTNRAFAH
LPAGTLDALLADIPALTNVLTYHVSPDYYPASQFVGQFGAVHQTVQGQPIRVDGRSGTVLLNGNTRVTTADVFASNGVVH
IIDAVLLPH

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI209863034, Length=135, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI209863011, Length=135, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI209862911, Length=135, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI209862907, Length=135, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI4507467, Length=139, Percent_Identity=35.9712230215827, Blast_Score=84, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRQFITRTAGLAVAAPFTGLAASPALAVTGSSNIVELAAATPDLSTLVTAVQAAGLVD
CCHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH
TLSSRGNFTVFAPTNRAFAHLPAGTLDALLADIPALTNVLTYHVSPDYYPASQFVGQFGA
HHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
VHQTVQGQPIRVDGRSGTVLLNGNTRVTTADVFASNGVVHIIDAVLLPH
HHHHCCCCCEEEECCCCEEEECCCCEEEEHHHHHCCCHHEEEHHHHCCC
>Mature Secondary Structure
MDRRQFITRTAGLAVAAPFTGLAASPALAVTGSSNIVELAAATPDLSTLVTAVQAAGLVD
CCHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH
TLSSRGNFTVFAPTNRAFAHLPAGTLDALLADIPALTNVLTYHVSPDYYPASQFVGQFGA
HHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
VHQTVQGQPIRVDGRSGTVLLNGNTRVTTADVFASNGVVHIIDAVLLPH
HHHHCCCCCEEEECCCCEEEECCCCEEEEHHHHHCCCHHEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]