Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056469

Identifier: 89056469

GI number: 89056469

Start: 4084845

End: 4085099

Strand: Direct

Name: 89056469

Synonym: Jann_3978

Alternate gene names: NA

Gene position: 4084845-4085099 (Clockwise)

Preceding gene: 89056468

Following gene: 89056475

Centisome position: 94.6

GC content: 54.12

Gene sequence:

>255_bases
GTGCATCGCTACCAGCGCGATATGAAGAGGTTGATCCATCGAATGAACCAAACCGCCCACATATCTCTTCGAAATCCATC
AATGTCAAAGAGCGAGAGACAAAAATTCACCAGCTGCGTTCTAACTTTTGAACGCGGCCCGCTTCAAACTGCCTCTGTTT
TTTCCGCGTTCCCGACCGCTTGCGTTGCCGCTGTGGCCTTGTCTGCGTCCCGGTGGCTCATCTCTGCGCCGCCGATGGGG
GGTATCTACGGTTAG

Upstream 100 bases:

>100_bases
AACCAGGGACAGTCTTCTGTTTGTTGTGCTTCAGGTTTCATCAGAAACCGAAAGCCGTCCAAACAGTGAAGCTGACACCG
GATAATCGCTAAACACCTAA

Downstream 100 bases:

>100_bases
TGCCCGGGGCTCGCAAGTGCTTTTTTGCAGAAAGATGACATTTTTTGGGAATAGACCTCTGCGCCCTTATTTTACTGGTA
CTTTTCCACTGAAAAACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MHRYQRDMKRLIHRMNQTAHISLRNPSMSKSERQKFTSCVLTFERGPLQTASVFSAFPTACVAAVALSASRWLISAPPMG
GIYG

Sequences:

>Translated_84_residues
MHRYQRDMKRLIHRMNQTAHISLRNPSMSKSERQKFTSCVLTFERGPLQTASVFSAFPTACVAAVALSASRWLISAPPMG
GIYG
>Mature_84_residues
MHRYQRDMKRLIHRMNQTAHISLRNPSMSKSERQKFTSCVLTFERGPLQTASVFSAFPTACVAAVALSASRWLISAPPMG
GIYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9399; Mature: 9399

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRYQRDMKRLIHRMNQTAHISLRNPSMSKSERQKFTSCVLTFERGPLQTASVFSAFPTA
CCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
CVAAVALSASRWLISAPPMGGIYG
HHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure
MHRYQRDMKRLIHRMNQTAHISLRNPSMSKSERQKFTSCVLTFERGPLQTASVFSAFPTA
CCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
CVAAVALSASRWLISAPPMGGIYG
HHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA