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The map label for this gene is ttdA [C]

Identifier: 89056461

GI number: 89056461

Start: 4067539

End: 4068495

Strand: Direct

Name: ttdA [C]

Synonym: Jann_3970

Alternate gene names: 89056461

Gene position: 4067539-4068495 (Clockwise)

Preceding gene: 89056460

Following gene: 89056462

Centisome position: 94.2

GC content: 62.7

Gene sequence:

>957_bases
ATGATACCGATATCTCTCATTCAGGAGACAGCCGAGGGTCTGATGGACAAGGCGGCGATCGAGATACCGCAGGACTATCT
GGACGGGTTGCAGGAGGCGGCGCGGACGGAGGATGGGGACCTGTCGTCCTTTGTGCTTAAGGCGATGCTGGATAACTACG
AGGCCGCCAAGGAGGATCGCCGCGCGATGTGTGGCGACACGGGCGTGCCACGCTGGTTCGTGAAGATGGGAAATGATGCG
AGCGTCGAGGGGGGCATGGTGGCGCTGGAGGCCGCGTTGCGCCGCGCGACGGCCAACGCGACCAACGGCGTGCCTTTGCG
GCCCAACCGGGTGCATCCGCTATGGCGGACGGATCACAACAACAATGTCGGTATCGGTGCGCCCGAGATCGAGTATGGGT
TCGAGCCGGAAGGGGAATGGATTGACCTGATCACGGTCCATAAAGGCGGGCTGTTCGGCACCGACTACCGCATGCTGTTC
CCAAGCGACGGCCTTCAGGGGATCAAGCGCTTCTACCTTGATAGCCTGATGGCGTTTGGCAAGCGCGGCCTCGCGTGTCA
GCCCGCGATCATCGGGATCGGGCTGGGAGGATCCAAGGATATCTGCATGACGTTGGGCAAGCGGGCGTCGACGTTGCGGG
TTGTTGGCTCGCGCAATTCTGACCCGCGCATCGCCGAGATGGAGGACGAGTTCAAGGCGTTGGGCAACTCCATCGGCATG
GGCGCGATGGGCTTTGTGGGCAAGAACATGGTGATCGATTGCAACATCGAGGTCGGCTATTGCCACACCGGCGGCCTGCC
GATGTCAGTGCACGCGTTCTGCCTGTCGTCGCGCCGGGCCGTGGCGCGTATCCACGCCGATGGACGGGTGGAGCATCGCA
CGGACCCCGATTGGTTCACCGACTATCAGCGTCGCGAAACGATTGACTGGCCTCTGGCGCAGGAGGCCGCGGAATGA

Upstream 100 bases:

>100_bases
TGGAACGGGGAAAAGGGCGGAGCGCCTCCGCTGCGGGTTGGAAAGAACCGCGAAGGATAGACGACCGTGAGCGCGCAAAA
CGCGGCTAAGGAGGGCAACG

Downstream 100 bases:

>100_bases
CGAGAATCTTTCGCCAAGAACGTCCTTGGGTGGGCAAGGATGCCTTCGCAAAACAAGGGTCACCAGCTCACGCCGCATCC
ACTCCAGGAGCTGCCCCATG

Product: fumarase subunit alpha

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIPISLIQETAEGLMDKAAIEIPQDYLDGLQEAARTEDGDLSSFVLKAMLDNYEAAKEDRRAMCGDTGVPRWFVKMGNDA
SVEGGMVALEAALRRATANATNGVPLRPNRVHPLWRTDHNNNVGIGAPEIEYGFEPEGEWIDLITVHKGGLFGTDYRMLF
PSDGLQGIKRFYLDSLMAFGKRGLACQPAIIGIGLGGSKDICMTLGKRASTLRVVGSRNSDPRIAEMEDEFKALGNSIGM
GAMGFVGKNMVIDCNIEVGYCHTGGLPMSVHAFCLSSRRAVARIHADGRVEHRTDPDWFTDYQRRETIDWPLAQEAAE

Sequences:

>Translated_318_residues
MIPISLIQETAEGLMDKAAIEIPQDYLDGLQEAARTEDGDLSSFVLKAMLDNYEAAKEDRRAMCGDTGVPRWFVKMGNDA
SVEGGMVALEAALRRATANATNGVPLRPNRVHPLWRTDHNNNVGIGAPEIEYGFEPEGEWIDLITVHKGGLFGTDYRMLF
PSDGLQGIKRFYLDSLMAFGKRGLACQPAIIGIGLGGSKDICMTLGKRASTLRVVGSRNSDPRIAEMEDEFKALGNSIGM
GAMGFVGKNMVIDCNIEVGYCHTGGLPMSVHAFCLSSRRAVARIHADGRVEHRTDPDWFTDYQRRETIDWPLAQEAAE
>Mature_318_residues
MIPISLIQETAEGLMDKAAIEIPQDYLDGLQEAARTEDGDLSSFVLKAMLDNYEAAKEDRRAMCGDTGVPRWFVKMGNDA
SVEGGMVALEAALRRATANATNGVPLRPNRVHPLWRTDHNNNVGIGAPEIEYGFEPEGEWIDLITVHKGGLFGTDYRMLF
PSDGLQGIKRFYLDSLMAFGKRGLACQPAIIGIGLGGSKDICMTLGKRASTLRVVGSRNSDPRIAEMEDEFKALGNSIGM
GAMGFVGKNMVIDCNIEVGYCHTGGLPMSVHAFCLSSRRAVARIHADGRVEHRTDPDWFTDYQRRETIDWPLAQEAAE

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789442, Length=291, Percent_Identity=26.4604810996564, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 34854; Mature: 34854

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPISLIQETAEGLMDKAAIEIPQDYLDGLQEAARTEDGDLSSFVLKAMLDNYEAAKEDR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RAMCGDTGVPRWFVKMGNDASVEGGMVALEAALRRATANATNGVPLRPNRVHPLWRTDHN
HHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC
NNVGIGAPEIEYGFEPEGEWIDLITVHKGGLFGTDYRMLFPSDGLQGIKRFYLDSLMAFG
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHC
KRGLACQPAIIGIGLGGSKDICMTLGKRASTLRVVGSRNSDPRIAEMEDEFKALGNSIGM
CCCCEECCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCC
GAMGFVGKNMVIDCNIEVGYCHTGGLPMSVHAFCLSSRRAVARIHADGRVEHRTDPDWFT
CCHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH
DYQRRETIDWPLAQEAAE
CHHHHCCCCCCHHHHHCC
>Mature Secondary Structure
MIPISLIQETAEGLMDKAAIEIPQDYLDGLQEAARTEDGDLSSFVLKAMLDNYEAAKEDR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RAMCGDTGVPRWFVKMGNDASVEGGMVALEAALRRATANATNGVPLRPNRVHPLWRTDHN
HHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC
NNVGIGAPEIEYGFEPEGEWIDLITVHKGGLFGTDYRMLFPSDGLQGIKRFYLDSLMAFG
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHC
KRGLACQPAIIGIGLGGSKDICMTLGKRASTLRVVGSRNSDPRIAEMEDEFKALGNSIGM
CCCCEECCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCC
GAMGFVGKNMVIDCNIEVGYCHTGGLPMSVHAFCLSSRRAVARIHADGRVEHRTDPDWFT
CCHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH
DYQRRETIDWPLAQEAAE
CHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]