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The map label for this gene is ndoA [H]

Identifier: 89056447

GI number: 89056447

Start: 4056017

End: 4056334

Strand: Direct

Name: ndoA [H]

Synonym: Jann_3956

Alternate gene names: 89056447

Gene position: 4056017-4056334 (Clockwise)

Preceding gene: 89056446

Following gene: 89056448

Centisome position: 93.93

GC content: 66.04

Gene sequence:

>318_bases
ATGCCGTGTGAGAAGACGTGGGTGGACGCCATTGCCTTGGTGGACGTGGAAAAGGCCTGGGTCACACGGGTGCAGGTGGG
CGAGCGGACGCTGGCGATCTACGACACGCCAGGCGGGCTGTTCGCATCGGCGGCGCTGTGTAACCACGGCGGCGCGGACC
TGTGTGACGGGTATTTCGACGGCCACGTGATTGAGTGCCCGCTCCATCAGGGGGCGTTCGACGTGCGCGACGGGCGGCCG
GCTGGTGCCCCTGCGGTGCGGCGGATGCTGACATATGAGGTGCGAGTGGCGGACGGAATGGTACAGGTTTGGCTATAG

Upstream 100 bases:

>100_bases
CTGCCCCGCCTGCATGAGACGTTGAAGGACCACATCCATGTGGAGCCCGGAGGCTACATCGGTGCGCATCGGGACATCTG
GCGGCAGATCCGGGCCAATA

Downstream 100 bases:

>100_bases
GGAAGGCGGCGGCCACTGCCCCAAGGCCGGACGGTTACCAGACCAGCCGCGATGCTGTTAAGCTGGAGCGATGAGCCAAC
CTGTTCCGCCTCCAGATTTC

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPCEKTWVDAIALVDVEKAWVTRVQVGERTLAIYDTPGGLFASAALCNHGGADLCDGYFDGHVIECPLHQGAFDVRDGRP
AGAPAVRRMLTYEVRVADGMVQVWL

Sequences:

>Translated_105_residues
MPCEKTWVDAIALVDVEKAWVTRVQVGERTLAIYDTPGGLFASAALCNHGGADLCDGYFDGHVIECPLHQGAFDVRDGRP
AGAPAVRRMLTYEVRVADGMVQVWL
>Mature_104_residues
PCEKTWVDAIALVDVEKAWVTRVQVGERTLAIYDTPGGLFASAALCNHGGADLCDGYFDGHVIECPLHQGAFDVRDGRPA
GAPAVRRMLTYEVRVADGMVQVWL

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.-.-.-

Molecular weight: Translated: 11418; Mature: 11287

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCEKTWVDAIALVDVEKAWVTRVQVGERTLAIYDTPGGLFASAALCNHGGADLCDGYFD
CCCCHHHHHEEEEEECCHHHHEEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
GHVIECPLHQGAFDVRDGRPAGAPAVRRMLTYEVRVADGMVQVWL
CEEEECCCCCCCEECCCCCCCCCHHHHHHHHHEEEECCCEEEEEC
>Mature Secondary Structure 
PCEKTWVDAIALVDVEKAWVTRVQVGERTLAIYDTPGGLFASAALCNHGGADLCDGYFD
CCCHHHHHEEEEEECCHHHHEEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
GHVIECPLHQGAFDVRDGRPAGAPAVRRMLTYEVRVADGMVQVWL
CEEEECCCCCCCEECCCCCCCCCHHHHHHHHHEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA