Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056448

Identifier: 89056448

GI number: 89056448

Start: 4056405

End: 4056722

Strand: Direct

Name: 89056448

Synonym: Jann_3957

Alternate gene names: NA

Gene position: 4056405-4056722 (Clockwise)

Preceding gene: 89056447

Following gene: 89056453

Centisome position: 93.94

GC content: 61.01

Gene sequence:

>318_bases
ATGAGCCAACCTGTTCCGCCTCCAGATTTCCCACACCTCATGCATGTTATTGCGTCTGCGCAGGTTCCTCGTCTCAGCCT
GGCGCCGACCCAGTGCATCATCGTCGCCGACAGCCCCACTCTCTCGGTCGACGATCAACTGCGCTTCCAGAGGGTGCGCG
CCGCCAGAACCGTGAGGGCGCTTACCCTGCTCCTCGGCAAGCTGCGACCGGCCATGACGACGGAACCCGGGCATCGTTAT
CTTATTGAGTTTGATGCGGAGGCCATCCCGAACGACGTGTCCGCAAGCTACGCCTTTCAACGCATCGAGGACGTCTGA

Upstream 100 bases:

>100_bases
GCGGACGGAATGGTACAGGTTTGGCTATAGGGAAGGCGGCGGCCACTGCCCCAAGGCCGGACGGTTACCAGACCAGCCGC
GATGCTGTTAAGCTGGAGCG

Downstream 100 bases:

>100_bases
GCAGAGAGAAGAGGCTACCCCTTCTTCCGCCCCTTCTCCAACCGGGCAAACAGCCTGCTCAGCCCAAAACACACGATGAA
GTAGAAGGCTGCCGTGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSQPVPPPDFPHLMHVIASAQVPRLSLAPTQCIIVADSPTLSVDDQLRFQRVRAARTVRALTLLLGKLRPAMTTEPGHRY
LIEFDAEAIPNDVSASYAFQRIEDV

Sequences:

>Translated_105_residues
MSQPVPPPDFPHLMHVIASAQVPRLSLAPTQCIIVADSPTLSVDDQLRFQRVRAARTVRALTLLLGKLRPAMTTEPGHRY
LIEFDAEAIPNDVSASYAFQRIEDV
>Mature_104_residues
SQPVPPPDFPHLMHVIASAQVPRLSLAPTQCIIVADSPTLSVDDQLRFQRVRAARTVRALTLLLGKLRPAMTTEPGHRYL
IEFDAEAIPNDVSASYAFQRIEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11648; Mature: 11516

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPVPPPDFPHLMHVIASAQVPRLSLAPTQCIIVADSPTLSVDDQLRFQRVRAARTVRA
CCCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
LTLLLGKLRPAMTTEPGHRYLIEFDAEAIPNDVSASYAFQRIEDV
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SQPVPPPDFPHLMHVIASAQVPRLSLAPTQCIIVADSPTLSVDDQLRFQRVRAARTVRA
CCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
LTLLLGKLRPAMTTEPGHRYLIEFDAEAIPNDVSASYAFQRIEDV
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA