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The map label for this gene is 89056446

Identifier: 89056446

GI number: 89056446

Start: 4055035

End: 4056027

Strand: Direct

Name: 89056446

Synonym: Jann_3955

Alternate gene names: NA

Gene position: 4055035-4056027 (Clockwise)

Preceding gene: 89056445

Following gene: 89056447

Centisome position: 93.91

GC content: 60.52

Gene sequence:

>993_bases
ATGCGGCAGGCATCCGTGAACATACGAGATCCCGACGTGGCACATTCGACGACGACAGGGGCGATCATCACCCCCCTGAC
CCAGGCTCTGGCCGAGGGAAAACTGACCCGGGAGCAGTTGAAGCACTTCATGCAGCGCAGCAACGCGCCTGGCCTGTGGC
GGGTGGCTTTGTGGCTGGTGATGCTGGCAGGGTCGACCATGCTAATCGTCCTGGCCTGGAACAGCTGGTTGATCTGGCCT
GCAATGTTTGTGCAGGGCGTGATCCTGGTCCATCACTTCTCGCTGCAACATGAATGCGTGCATTACACGGTGTTTCGCAC
GCGGTGGCTGAATGACGTGGTGGGGCAGATTTGCGGCTATACGATCCTGCTGCCGCATCGGTTCTTCCGGTACGAGCATT
GCGATCACCACACCTATACGCAGGTCGTGGGTGAAGACCCCGAGCAGATCCCGATGCCGAAGACGTTCGGAGAGTACTTC
CTGTATCTCAGCGCCCTGCCCTACTGGAAAACCAAGTTCACCGAGGTGTTTCGCCATGCAAGCGGTGGTCTGAGTGACGC
GGAGCGCGGCTTCATCCCCAAGGAAGAGCACGCCGCCGTCGCCCGCGATGCGCGTCTGATGCTGGCGTTCTATGCCGCCT
GCATTACCGGAATGGCCGCGAGCGGGTGGTGGGGCCTTGTCTGGCTGTGGTTCATCCCACTGATCTTGGGTGAGCCCGTC
ATGCGCTTCATCCGCATGACCGAACATGTGGGCCGCCCGAATGTGGCGCAGATGAGTGACAACACGCGCACCAATCTCGT
CTCTGCGCCGATGCGGTTCCTGTGTTGGAACATGAATTACCACGCGGAGCATCACTACGTCTCGTCGGTCCCGTTCCATG
CGCTGCCCCGCCTGCATGAGACGTTGAAGGACCACATCCATGTGGAGCCCGGAGGCTACATCGGTGCGCATCGGGACATC
TGGCGGCAGATCCGGGCCAATAATGCCGTGTGA

Upstream 100 bases:

>100_bases
TCGCGGTGGCTTGAACGCCCCTGCGTGACGCCTATACTTCACGTAATGTCGGCGGGCGAGTACGCGGGCATGGTGCGGAG
CACTCCCGTCTCCGGTGGTG

Downstream 100 bases:

>100_bases
GAAGACGTGGGTGGACGCCATTGCCTTGGTGGACGTGGAAAAGGCCTGGGTCACACGGGTGCAGGTGGGCGAGCGGACGC
TGGCGATCTACGACACGCCA

Product: fatty acid desaturase

Products: NA

Alternate protein names: Hydrocarbon Oxygenase MocD; Fatty Acid Desaturase Subfamily; Omega-3 Fatty Acid Desaturase Transmembrane Protein; Desaturase; Oxidoreductase; Fatty Acid Desaturase Family Protein; Transmembrane Fatty Acid Desaturase; Prolyl 4-Hydroxylase Subunit Alpha; Rieske Domain-Containing Protein; Fatty Acid Desaturase Subfamily Protein; Hydrocarbon Oxygenase; Rhizopine Catabolism Protein MocD; Rhizopine Catabolism Protein; Hydrocarbon Oxigenase Protein

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRQASVNIRDPDVAHSTTTGAIITPLTQALAEGKLTREQLKHFMQRSNAPGLWRVALWLVMLAGSTMLIVLAWNSWLIWP
AMFVQGVILVHHFSLQHECVHYTVFRTRWLNDVVGQICGYTILLPHRFFRYEHCDHHTYTQVVGEDPEQIPMPKTFGEYF
LYLSALPYWKTKFTEVFRHASGGLSDAERGFIPKEEHAAVARDARLMLAFYAACITGMAASGWWGLVWLWFIPLILGEPV
MRFIRMTEHVGRPNVAQMSDNTRTNLVSAPMRFLCWNMNYHAEHHYVSSVPFHALPRLHETLKDHIHVEPGGYIGAHRDI
WRQIRANNAV

Sequences:

>Translated_330_residues
MRQASVNIRDPDVAHSTTTGAIITPLTQALAEGKLTREQLKHFMQRSNAPGLWRVALWLVMLAGSTMLIVLAWNSWLIWP
AMFVQGVILVHHFSLQHECVHYTVFRTRWLNDVVGQICGYTILLPHRFFRYEHCDHHTYTQVVGEDPEQIPMPKTFGEYF
LYLSALPYWKTKFTEVFRHASGGLSDAERGFIPKEEHAAVARDARLMLAFYAACITGMAASGWWGLVWLWFIPLILGEPV
MRFIRMTEHVGRPNVAQMSDNTRTNLVSAPMRFLCWNMNYHAEHHYVSSVPFHALPRLHETLKDHIHVEPGGYIGAHRDI
WRQIRANNAV
>Mature_330_residues
MRQASVNIRDPDVAHSTTTGAIITPLTQALAEGKLTREQLKHFMQRSNAPGLWRVALWLVMLAGSTMLIVLAWNSWLIWP
AMFVQGVILVHHFSLQHECVHYTVFRTRWLNDVVGQICGYTILLPHRFFRYEHCDHHTYTQVVGEDPEQIPMPKTFGEYF
LYLSALPYWKTKFTEVFRHASGGLSDAERGFIPKEEHAAVARDARLMLAFYAACITGMAASGWWGLVWLWFIPLILGEPV
MRFIRMTEHVGRPNVAQMSDNTRTNLVSAPMRFLCWNMNYHAEHHYVSSVPFHALPRLHETLKDHIHVEPGGYIGAHRDI
WRQIRANNAV

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38022; Mature: 38022

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQASVNIRDPDVAHSTTTGAIITPLTQALAEGKLTREQLKHFMQRSNAPGLWRVALWLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
MLAGSTMLIVLAWNSWLIWPAMFVQGVILVHHFSLQHECVHYTVFRTRWLNDVVGQICGY
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
TILLPHRFFRYEHCDHHTYTQVVGEDPEQIPMPKTFGEYFLYLSALPYWKTKFTEVFRHA
EHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
SGGLSDAERGFIPKEEHAAVARDARLMLAFYAACITGMAASGWWGLVWLWFIPLILGEPV
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MRFIRMTEHVGRPNVAQMSDNTRTNLVSAPMRFLCWNMNYHAEHHYVSSVPFHALPRLHE
HHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHH
TLKDHIHVEPGGYIGAHRDIWRQIRANNAV
HHHHCEEECCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRQASVNIRDPDVAHSTTTGAIITPLTQALAEGKLTREQLKHFMQRSNAPGLWRVALWLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
MLAGSTMLIVLAWNSWLIWPAMFVQGVILVHHFSLQHECVHYTVFRTRWLNDVVGQICGY
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
TILLPHRFFRYEHCDHHTYTQVVGEDPEQIPMPKTFGEYFLYLSALPYWKTKFTEVFRHA
EHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
SGGLSDAERGFIPKEEHAAVARDARLMLAFYAACITGMAASGWWGLVWLWFIPLILGEPV
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MRFIRMTEHVGRPNVAQMSDNTRTNLVSAPMRFLCWNMNYHAEHHYVSSVPFHALPRLHE
HHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHH
TLKDHIHVEPGGYIGAHRDIWRQIRANNAV
HHHHCEEECCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA