Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056445

Identifier: 89056445

GI number: 89056445

Start: 4053866

End: 4054948

Strand: Direct

Name: 89056445

Synonym: Jann_3954

Alternate gene names: NA

Gene position: 4053866-4054948 (Clockwise)

Preceding gene: 89056442

Following gene: 89056446

Centisome position: 93.88

GC content: 64.73

Gene sequence:

>1083_bases
ATGTCGCCCCGCGCTGGTGCCAGAAATCTACTGCTGAACTGCGCGCAGGTGCGGGCCGGGCAAAGTCTTCTGATCGCCTA
TGAGCCTGCCCGGTTTGGGTACTTTGACGAGGAGGCCGTGGTTTGCGTCGCCCAGGAGGCGCGCGACCTGGGCCTGCATG
TGCGCACCTGCGATGTGGGGTTCAAAGCCACCAAGCCTCACCTGTCCACCATCCTTCTGGACCAGATGCGCCACGCGGAT
ATCGTCATTTTCTTTGCGCGCCTCGGCGATCAATTGCGGTTCTGCGAGATGCCTGCGGGCAAGACCATCATCACCAGTTT
CGCCGCCACGACTGAACTTCTGGGGTCTGGCTTCGGGACGGGCCATTATGGCGCATTCAGCGCGCTCAAGGCGGCGGTGG
ACAAGGCGCTGGCAAATGCAAGCGACGTGCGGCTGACCTGCGAAAACGGCACCGACGTCCGGGGCACGCCTCGGCCCAAC
GGCACGGAAACCTCGGTCACGCGCTTTCCACTGTCGGTTTTTGCGCCAATCCCGGCGCAGGATTTCTCGGGCCGGGTGGC
GATGGCGGGGTTCCTGACCGGCACCGGGTCACGCTACTATGCGCCCTACAATCTGGACCTCGACGGGCCGCTATTTGCGT
ATCTCGACAACGGGCGGCTCACGCGGTTTGAAGGCTCCGCGCAGGCCGTGCGCCACGCCAATGACCATTACGACCGCGTG
GCAGAGCGCTTCGATCTTGATCGTAACGCCATCCCTTCCTGGCACGCGGGCATCCACCCCGGCTGCGGTTTCCCGTGGGA
CATGGCCGACCATCCCGAGCGGTGGGGCGGCACCGCGTTTGGCAATCCGCGTATCGCCCATTTCCACACCTGCGGCAGCG
ACGCGCCGGGGGAAATCAGCTGGAACGTCATCGACCCGACAATCACGTTGGACGGTGTTCCGATGTGGGACAACGGGACG
TTCCACGCGCACCGTATCCCCGGCGGGGCCGCGATCCTGGCCCGATATCCTGACGTCGCCGACATGTTCGCCCGGCCCGA
CCAGTCTATTGGCATCGCCGCACCCGCGTTCGCGGTGGCTTGA

Upstream 100 bases:

>100_bases
TAAGCGAGGCTAATGGAATACATTAACACTTTCAAATGGAACGATACCCCCACGCAGCCATAGGTTGAACCGGTCGGCTG
CCCGACGAAGGATGCAACCC

Downstream 100 bases:

>100_bases
ACGCCCCTGCGTGACGCCTATACTTCACGTAATGTCGGCGGGCGAGTACGCGGGCATGGTGCGGAGCACTCCCGTCTCCG
GTGGTGATGCGGCAGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSPRAGARNLLLNCAQVRAGQSLLIAYEPARFGYFDEEAVVCVAQEARDLGLHVRTCDVGFKATKPHLSTILLDQMRHAD
IVIFFARLGDQLRFCEMPAGKTIITSFAATTELLGSGFGTGHYGAFSALKAAVDKALANASDVRLTCENGTDVRGTPRPN
GTETSVTRFPLSVFAPIPAQDFSGRVAMAGFLTGTGSRYYAPYNLDLDGPLFAYLDNGRLTRFEGSAQAVRHANDHYDRV
AERFDLDRNAIPSWHAGIHPGCGFPWDMADHPERWGGTAFGNPRIAHFHTCGSDAPGEISWNVIDPTITLDGVPMWDNGT
FHAHRIPGGAAILARYPDVADMFARPDQSIGIAAPAFAVA

Sequences:

>Translated_360_residues
MSPRAGARNLLLNCAQVRAGQSLLIAYEPARFGYFDEEAVVCVAQEARDLGLHVRTCDVGFKATKPHLSTILLDQMRHAD
IVIFFARLGDQLRFCEMPAGKTIITSFAATTELLGSGFGTGHYGAFSALKAAVDKALANASDVRLTCENGTDVRGTPRPN
GTETSVTRFPLSVFAPIPAQDFSGRVAMAGFLTGTGSRYYAPYNLDLDGPLFAYLDNGRLTRFEGSAQAVRHANDHYDRV
AERFDLDRNAIPSWHAGIHPGCGFPWDMADHPERWGGTAFGNPRIAHFHTCGSDAPGEISWNVIDPTITLDGVPMWDNGT
FHAHRIPGGAAILARYPDVADMFARPDQSIGIAAPAFAVA
>Mature_359_residues
SPRAGARNLLLNCAQVRAGQSLLIAYEPARFGYFDEEAVVCVAQEARDLGLHVRTCDVGFKATKPHLSTILLDQMRHADI
VIFFARLGDQLRFCEMPAGKTIITSFAATTELLGSGFGTGHYGAFSALKAAVDKALANASDVRLTCENGTDVRGTPRPNG
TETSVTRFPLSVFAPIPAQDFSGRVAMAGFLTGTGSRYYAPYNLDLDGPLFAYLDNGRLTRFEGSAQAVRHANDHYDRVA
ERFDLDRNAIPSWHAGIHPGCGFPWDMADHPERWGGTAFGNPRIAHFHTCGSDAPGEISWNVIDPTITLDGVPMWDNGTF
HAHRIPGGAAILARYPDVADMFARPDQSIGIAAPAFAVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38910; Mature: 38779

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRAGARNLLLNCAQVRAGQSLLIAYEPARFGYFDEEAVVCVAQEARDLGLHVRTCDVG
CCCCCCHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCEEEEEEHHHHHCCCEEEEECCC
FKATKPHLSTILLDQMRHADIVIFFARLGDQLRFCEMPAGKTIITSFAATTELLGSGFGT
CCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
GHYGAFSALKAAVDKALANASDVRLTCENGTDVRGTPRPNGTETSVTRFPLSVFAPIPAQ
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCCC
DFSGRVAMAGFLTGTGSRYYAPYNLDLDGPLFAYLDNGRLTRFEGSAQAVRHANDHYDRV
CCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEECCHHHHHHHCCHHHHHH
AERFDLDRNAIPSWHAGIHPGCGFPWDMADHPERWGGTAFGNPRIAHFHTCGSDAPGEIS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCEEE
WNVIDPTITLDGVPMWDNGTFHAHRIPGGAAILARYPDVADMFARPDQSIGIAAPAFAVA
EEEECCEEEECCEEECCCCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCCEECCHHHCC
>Mature Secondary Structure 
SPRAGARNLLLNCAQVRAGQSLLIAYEPARFGYFDEEAVVCVAQEARDLGLHVRTCDVG
CCCCCHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCEEEEEEHHHHHCCCEEEEECCC
FKATKPHLSTILLDQMRHADIVIFFARLGDQLRFCEMPAGKTIITSFAATTELLGSGFGT
CCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
GHYGAFSALKAAVDKALANASDVRLTCENGTDVRGTPRPNGTETSVTRFPLSVFAPIPAQ
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCCC
DFSGRVAMAGFLTGTGSRYYAPYNLDLDGPLFAYLDNGRLTRFEGSAQAVRHANDHYDRV
CCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEECCHHHHHHHCCHHHHHH
AERFDLDRNAIPSWHAGIHPGCGFPWDMADHPERWGGTAFGNPRIAHFHTCGSDAPGEIS
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCEEE
WNVIDPTITLDGVPMWDNGTFHAHRIPGGAAILARYPDVADMFARPDQSIGIAAPAFAVA
EEEECCEEEECCEEECCCCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCCEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA