| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yhaI [H]
Identifier: 89056399
GI number: 89056399
Start: 4005791
End: 4006372
Strand: Direct
Name: yhaI [H]
Synonym: Jann_3908
Alternate gene names: 89056399
Gene position: 4005791-4006372 (Clockwise)
Preceding gene: 89056398
Following gene: 89056404
Centisome position: 92.77
GC content: 62.03
Gene sequence:
>582_bases ATGGGTTTCGGAGCGGCAGTCGTTCAGTGTTACGGAAACATGTTGAATTTTTCCGGGCGCGCCCGGCGGGCGGAATATTG GTGGTTCGTGCTGTGGACCATTCTGGCCGGCGCCGCGATGGGCGGAGCAATCGGCTACTACCTTTTTTCCAACCCTGACT TCCTTGGCCAGTTCAGCGCCCCCAAGGGCGGGGCTGCACCCGACATCAATATCGACGCGCAGTTGCGCACCTATGGCGGC TATTATTTCGCGGCGAACCTGGTGCTGTTCTGGCTCCCCGGCCTCGCCGTCACCATCCGCAGACTTCATGATACCGACCG CTCCGGTGCGTGGTATTTCATTCAGCTGGTCCCCCTCATCGGCTTTATCTGGTTCCTGGTGCTGATGTGTCTTCCCGGCA CCTACGGCACCAACCGTTTTGGCGGCGACAGCGCGCCAGATCGCAAGCAACCCACGCCCGCCCATCCCGCATTCGCCGCC CAACTTCACGGCGAGGAACGGGACCGCGCCGAACTCGCGCGGCGGGCAGCGGCACAGGATTACTACAAGCGCCGCGTTCT GCCTTCGATCCAGAAGGTCTGA
Upstream 100 bases:
>100_bases CACAATTCCCCAAACATCGTCCCGCTCTCGCCCCATCATCGGCACAATTCGCCAAGACAACAATCTGTGCAGGACATCAG AGGTAGTCGAGGGCACGGGT
Downstream 100 bases:
>100_bases CTCCACCTCCCCTTGCTCAAGGCCGGTCGCGGGGTGGGACCGCTCAGGTCGCCAGAAGGACAGTCGCGTGGCAATGACCG CTAGTAGGAATATTCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGFGAAVVQCYGNMLNFSGRARRAEYWWFVLWTILAGAAMGGAIGYYLFSNPDFLGQFSAPKGGAAPDINIDAQLRTYGG YYFAANLVLFWLPGLAVTIRRLHDTDRSGAWYFIQLVPLIGFIWFLVLMCLPGTYGTNRFGGDSAPDRKQPTPAHPAFAA QLHGEERDRAELARRAAAQDYYKRRVLPSIQKV
Sequences:
>Translated_193_residues MGFGAAVVQCYGNMLNFSGRARRAEYWWFVLWTILAGAAMGGAIGYYLFSNPDFLGQFSAPKGGAAPDINIDAQLRTYGG YYFAANLVLFWLPGLAVTIRRLHDTDRSGAWYFIQLVPLIGFIWFLVLMCLPGTYGTNRFGGDSAPDRKQPTPAHPAFAA QLHGEERDRAELARRAAAQDYYKRRVLPSIQKV >Mature_192_residues GFGAAVVQCYGNMLNFSGRARRAEYWWFVLWTILAGAAMGGAIGYYLFSNPDFLGQFSAPKGGAAPDINIDAQLRTYGGY YFAANLVLFWLPGLAVTIRRLHDTDRSGAWYFIQLVPLIGFIWFLVLMCLPGTYGTNRFGGDSAPDRKQPTPAHPAFAAQ LHGEERDRAELARRAAAQDYYKRRVLPSIQKV
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=131, Percent_Identity=38.1679389312977, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI2367196, Length=136, Percent_Identity=36.7647058823529, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 21509; Mature: 21378
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGAAVVQCYGNMLNFSGRARRAEYWWFVLWTILAGAAMGGAIGYYLFSNPDFLGQFSA CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC PKGGAAPDINIDAQLRTYGGYYFAANLVLFWLPGLAVTIRRLHDTDRSGAWYFIQLVPLI CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GFIWFLVLMCLPGTYGTNRFGGDSAPDRKQPTPAHPAFAAQLHGEERDRAELARRAAAQD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH YYKRRVLPSIQKV HHHHHHHHHHHCC >Mature Secondary Structure GFGAAVVQCYGNMLNFSGRARRAEYWWFVLWTILAGAAMGGAIGYYLFSNPDFLGQFSA CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC PKGGAAPDINIDAQLRTYGGYYFAANLVLFWLPGLAVTIRRLHDTDRSGAWYFIQLVPLI CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GFIWFLVLMCLPGTYGTNRFGGDSAPDRKQPTPAHPAFAAQLHGEERDRAELARRAAAQD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH YYKRRVLPSIQKV HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]