Click here to switch to the map view.

The map label for this gene is 89056395

Identifier: 89056395

GI number: 89056395

Start: 4002658

End: 4003167

Strand: Direct

Name: 89056395

Synonym: Jann_3904

Alternate gene names: NA

Gene position: 4002658-4003167 (Clockwise)

Preceding gene: 89056394

Following gene: 89056396

Centisome position: 92.7

GC content: 62.55

Gene sequence:

>510_bases
ATGACCAACCTCCAAATCTTTGCGCTCAACGAGCCCATTGATGTCTCCCATACCAACCTCACCCGTCAGACCGGCGAAAC
ACCCGAACTACCGCCCCTTGCAGAGTGGCTCGGCGTAGATACGCTCGACACCGATCAGATCGAGCTGTTCCCAATCAAGG
ACCTCAGCGATATGCCGTTGAGCGAATATATTCGCCTCGCCTTCGCCCCGGAGGAGCAGATTGCACCCGCCGACATAACC
CGGCTCGATGCGCTCTCGGGTGCGGTTCTTCTTGTCCCCGAAACGGCGCTCTCTGCCGCTCCCAGACCCGGTTCGCAGGC
GACGCTGATCGCCTCCGTTCCACTGGCACAGGCGGACAACTCGGGTTCATTGCCCAAAGCAGATGTCGCGCCCGTGCCCT
CAGCCGCGCCTGCCCCGGCGGAGCCTGAAGCCCCACCGCCCATCGCCCTCTACGCGTTGATTGGCATGGCGATCCTGGCC
GCCCTGATCTTCTTTGTGGGGTGGCGCTAG

Upstream 100 bases:

>100_bases
GCTACGTCGAAAGCGGGTATGAGCTGCGGAGCATACCGGACGGCAAAGATGTGGCACGTTTGCTGAAATCTCTTAGATCC
CAAGCTTCCGAGGCGACGCC

Downstream 100 bases:

>100_bases
TGCCTGTGCCCTTGCAATCATCTGCCCCACGCGGCAGGCACGCGCCATGACCAACGCGCTGCTCCACAATGCCCGGCTGA
TTGACCCAGAGGCCGGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MTNLQIFALNEPIDVSHTNLTRQTGETPELPPLAEWLGVDTLDTDQIELFPIKDLSDMPLSEYIRLAFAPEEQIAPADIT
RLDALSGAVLLVPETALSAAPRPGSQATLIASVPLAQADNSGSLPKADVAPVPSAAPAPAEPEAPPPIALYALIGMAILA
ALIFFVGWR

Sequences:

>Translated_169_residues
MTNLQIFALNEPIDVSHTNLTRQTGETPELPPLAEWLGVDTLDTDQIELFPIKDLSDMPLSEYIRLAFAPEEQIAPADIT
RLDALSGAVLLVPETALSAAPRPGSQATLIASVPLAQADNSGSLPKADVAPVPSAAPAPAEPEAPPPIALYALIGMAILA
ALIFFVGWR
>Mature_168_residues
TNLQIFALNEPIDVSHTNLTRQTGETPELPPLAEWLGVDTLDTDQIELFPIKDLSDMPLSEYIRLAFAPEEQIAPADITR
LDALSGAVLLVPETALSAAPRPGSQATLIASVPLAQADNSGSLPKADVAPVPSAAPAPAEPEAPPPIALYALIGMAILAA
LIFFVGWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17811; Mature: 17679

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLQIFALNEPIDVSHTNLTRQTGETPELPPLAEWLGVDTLDTDQIELFPIKDLSDMPL
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCH
SEYIRLAFAPEEQIAPADITRLDALSGAVLLVPETALSAAPRPGSQATLIASVPLAQADN
HHHHEEEECCCHHCCCCCHHHHHHHCCEEEEEECHHHHCCCCCCCCEEEEEECCCCCCCC
SGSLPKADVAPVPSAAPAPAEPEAPPPIALYALIGMAILAALIFFVGWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNLQIFALNEPIDVSHTNLTRQTGETPELPPLAEWLGVDTLDTDQIELFPIKDLSDMPL
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCH
SEYIRLAFAPEEQIAPADITRLDALSGAVLLVPETALSAAPRPGSQATLIASVPLAQADN
HHHHEEEECCCHHCCCCCHHHHHHHCCEEEEEECHHHHCCCCCCCCEEEEEECCCCCCCC
SGSLPKADVAPVPSAAPAPAEPEAPPPIALYALIGMAILAALIFFVGWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA