| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056366
Identifier: 89056366
GI number: 89056366
Start: 3974363
End: 3974767
Strand: Direct
Name: 89056366
Synonym: Jann_3875
Alternate gene names: NA
Gene position: 3974363-3974767 (Clockwise)
Preceding gene: 89056363
Following gene: 89056367
Centisome position: 92.04
GC content: 60.25
Gene sequence:
>405_bases ATGCTCGACATCCCCTTTTTCGCAGCTAGGCTAGATCGCATGGGCAGCGACAAGAACGAAATGGCCAAGGACCGCACGGA TTGGGCAGAGGATCGCACGATCCTGGCCAACGAGCGGACTTTTGCGGGCTGGATGCGCACCGGGATGGCCGCCGTCGCCA TAGCCCTTGGCCTGAAAGCGGTTTTTGGTGAGTTTGAGCCGACATGGGCCGCGAAGGCGACCTCCAGCGTGTTCATCGTA TTGGCCTGCTACATATTCTACGCCGCCCGCCAACAGGCCTGCGCCACGCAACAGCGGATGGAACAGCACGACGCAACGGC CAAATCTACCGGCTCGATGACGGCAACGGCAATCATCCTGGCCATCGGCTCCATTCTGACCGGCGCGATTCTTTGGCTGC TGTAA
Upstream 100 bases:
>100_bases CTTTCCGCGGATCTGGTCGCTGCCCCTAGCAGCAATCTCAGTTTACGAAGTAGCGCCGATCCTTTCAAGTGCAAGTAGTG TATACAAGTATTCTGATACG
Downstream 100 bases:
>100_bases TCCGGTGGACGGCGCGGGGGCAGAGGCCTAGTTTGACCTCGGCAATTGCGTGAGGCGACATGACCGAGACCCCTGATACT GGCTACCAAGTCCTTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLDIPFFAARLDRMGSDKNEMAKDRTDWAEDRTILANERTFAGWMRTGMAAVAIALGLKAVFGEFEPTWAAKATSSVFIV LACYIFYAARQQACATQQRMEQHDATAKSTGSMTATAIILAIGSILTGAILWLL
Sequences:
>Translated_134_residues MLDIPFFAARLDRMGSDKNEMAKDRTDWAEDRTILANERTFAGWMRTGMAAVAIALGLKAVFGEFEPTWAAKATSSVFIV LACYIFYAARQQACATQQRMEQHDATAKSTGSMTATAIILAIGSILTGAILWLL >Mature_134_residues MLDIPFFAARLDRMGSDKNEMAKDRTDWAEDRTILANERTFAGWMRTGMAAVAIALGLKAVFGEFEPTWAAKATSSVFIV LACYIFYAARQQACATQQRMEQHDATAKSTGSMTATAIILAIGSILTGAILWLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14657; Mature: 14657
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIPFFAARLDRMGSDKNEMAKDRTDWAEDRTILANERTFAGWMRTGMAAVAIALGLKA CCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH VFGEFEPTWAAKATSSVFIVLACYIFYAARQQACATQQRMEQHDATAKSTGSMTATAIIL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AIGSILTGAILWLL HHHHHHHHHHHHHC >Mature Secondary Structure MLDIPFFAARLDRMGSDKNEMAKDRTDWAEDRTILANERTFAGWMRTGMAAVAIALGLKA CCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH VFGEFEPTWAAKATSSVFIVLACYIFYAARQQACATQQRMEQHDATAKSTGSMTATAIIL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AIGSILTGAILWLL HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA