Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056360

Identifier: 89056360

GI number: 89056360

Start: 3968300

End: 3968770

Strand: Direct

Name: 89056360

Synonym: Jann_3869

Alternate gene names: NA

Gene position: 3968300-3968770 (Clockwise)

Preceding gene: 89056359

Following gene: 89056363

Centisome position: 91.9

GC content: 64.33

Gene sequence:

>471_bases
ATGAAATTCAAGGTCTCTGAAGACATAGACGCGCCGGCGCAGATCACCTGGGCGCGGTTCACAGATTTCTCAGGCATAGA
AGCGGACGCGAAGGGGCGCGGGGCGGATATCGCGCGCGTGGGGAACTGGTCGGACCCGGCCGAGGGATGCGGTTGGCGTG
GCTCCATCAAGGTACGGGGCCGGGTGCGGCCCGTGACGTCCAAGATCAGCGCAATTCACCAGCCCGAGCGGTGTGAAATC
GCGACGACAATCGGCGGCATGGATGCCGTCTACGAGATGGCATTCCTGTCGCTCAGGGACGACATGACCCGCGTGCAGGT
GGTTCTGGACCTGTCGGCCAACACGCTGTCCGCGCGGCTTGCGATGCAAACGTTGAAACTGGCGCGGGGCCGTGTGATGC
AGCGCTTGCAGGGCCTGTTGGCACGCCAGGGCAACCTCGCCGAAGAGGATTATCGCCGCGCGCGCGACTAG

Upstream 100 bases:

>100_bases
CGATTAACGCGATCATGGCCGCCCGCCTGCGCATAGTGGCCTTGACGCACCCGCTTTGGAGTGGACAGATCAGCGGCGCA
CAGAAACATGTGGGACGGGC

Downstream 100 bases:

>100_bases
CCGACAGGCCAACGTCGTCCCGATCAGTACCCCTGAAATTGATGCGGCGCTTACGGCTGCGGCGTCCCGGCCCGACGCGC
GCCCCGTTTGATGCCCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKFKVSEDIDAPAQITWARFTDFSGIEADAKGRGADIARVGNWSDPAEGCGWRGSIKVRGRVRPVTSKISAIHQPERCEI
ATTIGGMDAVYEMAFLSLRDDMTRVQVVLDLSANTLSARLAMQTLKLARGRVMQRLQGLLARQGNLAEEDYRRARD

Sequences:

>Translated_156_residues
MKFKVSEDIDAPAQITWARFTDFSGIEADAKGRGADIARVGNWSDPAEGCGWRGSIKVRGRVRPVTSKISAIHQPERCEI
ATTIGGMDAVYEMAFLSLRDDMTRVQVVLDLSANTLSARLAMQTLKLARGRVMQRLQGLLARQGNLAEEDYRRARD
>Mature_156_residues
MKFKVSEDIDAPAQITWARFTDFSGIEADAKGRGADIARVGNWSDPAEGCGWRGSIKVRGRVRPVTSKISAIHQPERCEI
ATTIGGMDAVYEMAFLSLRDDMTRVQVVLDLSANTLSARLAMQTLKLARGRVMQRLQGLLARQGNLAEEDYRRARD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17297; Mature: 17297

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKVSEDIDAPAQITWARFTDFSGIEADAKGRGADIARVGNWSDPAEGCGWRGSIKVRG
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECC
RVRPVTSKISAIHQPERCEIATTIGGMDAVYEMAFLSLRDDMTRVQVVLDLSANTLSARL
EECHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHH
AMQTLKLARGRVMQRLQGLLARQGNLAEEDYRRARD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKFKVSEDIDAPAQITWARFTDFSGIEADAKGRGADIARVGNWSDPAEGCGWRGSIKVRG
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECC
RVRPVTSKISAIHQPERCEIATTIGGMDAVYEMAFLSLRDDMTRVQVVLDLSANTLSARL
EECHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHH
AMQTLKLARGRVMQRLQGLLARQGNLAEEDYRRARD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA