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The map label for this gene is nudC [H]

Identifier: 89056359

GI number: 89056359

Start: 3967223

End: 3968206

Strand: Direct

Name: nudC [H]

Synonym: Jann_3868

Alternate gene names: 89056359

Gene position: 3967223-3968206 (Clockwise)

Preceding gene: 89056356

Following gene: 89056360

Centisome position: 91.88

GC content: 62.91

Gene sequence:

>984_bases
ATGCGTGCCAGCGAAGATGTAACTTTCGGGACCTCGGGTCTCGATCGCGCGGCAGCGCTGCGGCTGGATCCGGGTCGCCT
TGCCGCCGCGTTGATTGCGGGGGCACCCGTTCTGCCGGTCTGGCGCGGCAAGGTCATGGTCGAGGGCGCGCCAGAAACCG
GTGATGTGCGCTTGGCATATCGCAAGATGGGCGATCTCGTCCTGTCCAAAGCCGATGAGACCCCAGTTTTTCTGGGCTTG
GATAGAGACGGCGAGACGCCGGTCTTCGCGTTGGATATCTCGGCCTGGACGCCAAAATCGGTGGATGAGGCCGCTGTGAC
CGCCTTTCTGGATCCGTCCGTGCAGGTCCATCCGGCGGAGCGCGTGGCGGGCGCCGGATTTCGCGAGTTGCGGGCCCTGA
TGACCCACCTCACAAAGCGCGAGGCGGAGATTTCGGCCACGGCGCGCGCAATCCTCACCTGGCATTCGACCCATCAGTTC
TGTGCGAAATGCGGTGCCAAAAGCACCCTGTCCCAGGCCGGGTGGCAGCGTGATTGTGCCGCCTGCGATGCCAAACACTT
CCCCCGCACCGATCCCGTCGTGATCATGTTGATCACAAGGGGCGACAATGTCCTGGTGGGCCGCTCCCCCGGCTGGCCCG
AGGGGATGTATTCGCTTCTGGCGGGCTTTGTGGAGCCCGGAGAAAGCATCGAGGCCGCCGTGCGCCGTGAGGTGTTTGAG
GAGGCAGGCATTGACGTGGGCCGCGTTGATTACCTCTCCAGCCAGCCCTGGCCCTTTCCGGCTTCGCTGATGTTTGGATG
CCGGGGCGAGGCGCTATCGACAGAGATCGACATCGACCCCGTTGAAATTGAGGACGCAAAATGGGTCAGCCGATCTGAAA
TGCTGGAGGTATTCGCGGGCAACGACGCAACGATGCTGCCCGCCCGCAAGGGTGCTATCGCGCATTTCCTGCTCCACCAT
TGGTTGTCAGACACGCTCGATTAA

Upstream 100 bases:

>100_bases
AAGACCAACGCGCAATCTGCGGCCATTTTACCACGACGTCAGCATCAGTGTTGCCACCTTGCCATAACCATGGCAGGTGA
CCTTTACGGAAGGGGACATG

Downstream 100 bases:

>100_bases
CGCGATCATGGCCGCCCGCCTGCGCATAGTGGCCTTGACGCACCCGCTTTGGAGTGGACAGATCAGCGGCGCACAGAAAC
ATGTGGGACGGGCATGAAAT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRASEDVTFGTSGLDRAAALRLDPGRLAAALIAGAPVLPVWRGKVMVEGAPETGDVRLAYRKMGDLVLSKADETPVFLGL
DRDGETPVFALDISAWTPKSVDEAAVTAFLDPSVQVHPAERVAGAGFRELRALMTHLTKREAEISATARAILTWHSTHQF
CAKCGAKSTLSQAGWQRDCAACDAKHFPRTDPVVIMLITRGDNVLVGRSPGWPEGMYSLLAGFVEPGESIEAAVRREVFE
EAGIDVGRVDYLSSQPWPFPASLMFGCRGEALSTEIDIDPVEIEDAKWVSRSEMLEVFAGNDATMLPARKGAIAHFLLHH
WLSDTLD

Sequences:

>Translated_327_residues
MRASEDVTFGTSGLDRAAALRLDPGRLAAALIAGAPVLPVWRGKVMVEGAPETGDVRLAYRKMGDLVLSKADETPVFLGL
DRDGETPVFALDISAWTPKSVDEAAVTAFLDPSVQVHPAERVAGAGFRELRALMTHLTKREAEISATARAILTWHSTHQF
CAKCGAKSTLSQAGWQRDCAACDAKHFPRTDPVVIMLITRGDNVLVGRSPGWPEGMYSLLAGFVEPGESIEAAVRREVFE
EAGIDVGRVDYLSSQPWPFPASLMFGCRGEALSTEIDIDPVEIEDAKWVSRSEMLEVFAGNDATMLPARKGAIAHFLLHH
WLSDTLD
>Mature_327_residues
MRASEDVTFGTSGLDRAAALRLDPGRLAAALIAGAPVLPVWRGKVMVEGAPETGDVRLAYRKMGDLVLSKADETPVFLGL
DRDGETPVFALDISAWTPKSVDEAAVTAFLDPSVQVHPAERVAGAGFRELRALMTHLTKREAEISATARAILTWHSTHQF
CAKCGAKSTLSQAGWQRDCAACDAKHFPRTDPVVIMLITRGDNVLVGRSPGWPEGMYSLLAGFVEPGESIEAAVRREVFE
EAGIDVGRVDYLSSQPWPFPASLMFGCRGEALSTEIDIDPVEIEDAKWVSRSEMLEVFAGNDATMLPARKGAIAHFLLHH
WLSDTLD

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=288, Percent_Identity=37.8472222222222, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI50593112, Length=210, Percent_Identity=38.0952380952381, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI48994995, Length=152, Percent_Identity=36.1842105263158, Blast_Score=121, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71986510, Length=226, Percent_Identity=30.5309734513274, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI212645999, Length=226, Percent_Identity=30.5309734513274, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321371, Length=338, Percent_Identity=27.2189349112426, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 35454; Mature: 35454

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASEDVTFGTSGLDRAAALRLDPGRLAAALIAGAPVLPVWRGKVMVEGAPETGDVRLAY
CCCCCCCEECCCCCCCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCEEEHH
RKMGDLVLSKADETPVFLGLDRDGETPVFALDISAWTPKSVDEAAVTAFLDPSVQVHPAE
HHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHEEECCCCEECCHH
RVAGAGFRELRALMTHLTKREAEISATARAILTWHSTHQFCAKCGAKSTLSQAGWQRDCA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCHHHHHHCCCCHHHH
ACDAKHFPRTDPVVIMLITRGDNVLVGRSPGWPEGMYSLLAGFVEPGESIEAAVRREVFE
HCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAGIDVGRVDYLSSQPWPFPASLMFGCRGEALSTEIDIDPVEIEDAKWVSRSEMLEVFAG
HHCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHCC
NDATMLPARKGAIAHFLLHHWLSDTLD
CCCEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRASEDVTFGTSGLDRAAALRLDPGRLAAALIAGAPVLPVWRGKVMVEGAPETGDVRLAY
CCCCCCCEECCCCCCCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCEEEHH
RKMGDLVLSKADETPVFLGLDRDGETPVFALDISAWTPKSVDEAAVTAFLDPSVQVHPAE
HHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHEEECCCCEECCHH
RVAGAGFRELRALMTHLTKREAEISATARAILTWHSTHQFCAKCGAKSTLSQAGWQRDCA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCHHHHHHCCCCHHHH
ACDAKHFPRTDPVVIMLITRGDNVLVGRSPGWPEGMYSLLAGFVEPGESIEAAVRREVFE
HCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAGIDVGRVDYLSSQPWPFPASLMFGCRGEALSTEIDIDPVEIEDAKWVSRSEMLEVFAG
HHCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHCC
NDATMLPARKGAIAHFLLHHWLSDTLD
CCCEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA