| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is pheA [H]
Identifier: 89056356
GI number: 89056356
Start: 3963307
End: 3964137
Strand: Direct
Name: pheA [H]
Synonym: Jann_3865
Alternate gene names: 89056356
Gene position: 3963307-3964137 (Clockwise)
Preceding gene: 89056350
Following gene: 89056359
Centisome position: 91.79
GC content: 60.05
Gene sequence:
>831_bases ATGACGGACCGTATCGCCTTCCAGGGAGAGCCCGGCGCCTATTCCCATCAGGCCTGCCATGAGGCTCGCCCCAACCTCGA AGCCCTGCCCTGTGCAAGCTTCGAGGATGTGATCGAGGCTGTCAGGGCCGGAGACGCGCAACAGGCGATGGTCCCGGTGG AGAACTCAACCTACGGGCGTGTTGCGGACATCCACAGGCTTCTGCCCGAATCGGGTTTGCACATCGTGGACGAGGCATTC GTACGCGTGCACATCAACCTTCTGGCGGTGCCTGGCGCGACGCTGGAAAACGTGACCGAGGCCCACAGCCACCTTGTTTT ACTCCCCCAATGCAGCAAGTTTCTTGCGAAGAACGGGATCAAGGGCCGGGTCAGCAGCGACAATGCGCGCGCCGCGCGTG ATGTGGCGGATTGGGCCGATCCGTCGAAGGCCGCGCTCGCTTCAGAGCTGGCCGGGGAGATCTACGGCCTCAACGCTCTG GCCCGCCATATCGAGGATCATGACCGCAACACCACGCGGTTTCTGGTCATGGCACCGGACGCGGACATGACCCGACGCGC GGAACGGATGATGACGACTTTCGTCTTTCGTGTCCGAAACATTCCTGCGGCACTATATAAAGCGATGGGTGGGTTTGCCA CCAATAGTGTGAACATGACCAAGCTCGAATCATACATGGTTGACGGGTCATTCACCGCGACGCAGTTCTACTCGGACATC GAAGGGCATCCCGATGACGCCAACGTTCAGCTTGCGATGGAAGAACTGGGATATTTCACAGACCAGCTAAAGATCCTCGG CACCTATCCTGCCGATGCCGCCCGGGACTGA
Upstream 100 bases:
>100_bases CACGGGAATGTCGCTGGTCTTGCGTATCTATTGTGTTCCGTCTGCCTATGGCAAGGTGTAGTCAGCGCGACGAAACGACC TTTTTGCTTTGGATTTGCCT
Downstream 100 bases:
>100_bases GCGCGGCTATCCGGCCGGTTCCGCCATCATTTCGGCAAACCACAGCCAGGCGTCTTCGGCGATGGCAGGGCCGCCCTCAT AAAACCAATGGGTGTGGCCG
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTDRIAFQGEPGAYSHQACHEARPNLEALPCASFEDVIEAVRAGDAQQAMVPVENSTYGRVADIHRLLPESGLHIVDEAF VRVHINLLAVPGATLENVTEAHSHLVLLPQCSKFLAKNGIKGRVSSDNARAARDVADWADPSKAALASELAGEIYGLNAL ARHIEDHDRNTTRFLVMAPDADMTRRAERMMTTFVFRVRNIPAALYKAMGGFATNSVNMTKLESYMVDGSFTATQFYSDI EGHPDDANVQLAMEELGYFTDQLKILGTYPADAARD
Sequences:
>Translated_276_residues MTDRIAFQGEPGAYSHQACHEARPNLEALPCASFEDVIEAVRAGDAQQAMVPVENSTYGRVADIHRLLPESGLHIVDEAF VRVHINLLAVPGATLENVTEAHSHLVLLPQCSKFLAKNGIKGRVSSDNARAARDVADWADPSKAALASELAGEIYGLNAL ARHIEDHDRNTTRFLVMAPDADMTRRAERMMTTFVFRVRNIPAALYKAMGGFATNSVNMTKLESYMVDGSFTATQFYSDI EGHPDDANVQLAMEELGYFTDQLKILGTYPADAARD >Mature_275_residues TDRIAFQGEPGAYSHQACHEARPNLEALPCASFEDVIEAVRAGDAQQAMVPVENSTYGRVADIHRLLPESGLHIVDEAFV RVHINLLAVPGATLENVTEAHSHLVLLPQCSKFLAKNGIKGRVSSDNARAARDVADWADPSKAALASELAGEIYGLNALA RHIEDHDRNTTRFLVMAPDADMTRRAERMMTTFVFRVRNIPAALYKAMGGFATNSVNMTKLESYMVDGSFTATQFYSDIE GHPDDANVQLAMEELGYFTDQLKILGTYPADAARD
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=274, Percent_Identity=33.9416058394161, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 30238; Mature: 30107
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRIAFQGEPGAYSHQACHEARPNLEALPCASFEDVIEAVRAGDAQQAMVPVENSTYGR CCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCCCCH VADIHRLLPESGLHIVDEAFVRVHINLLAVPGATLENVTEAHSHLVLLPQCSKFLAKNGI HHHHHHHCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHCEEECHHHHHHHHCCCC KGRVSSDNARAARDVADWADPSKAALASELAGEIYGLNALARHIEDHDRNTTRFLVMAPD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ADMTRRAERMMTTFVFRVRNIPAALYKAMGGFATNSVNMTKLESYMVDGSFTATQFYSDI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHC EGHPDDANVQLAMEELGYFTDQLKILGTYPADAARD CCCCCCCCCEEHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure TDRIAFQGEPGAYSHQACHEARPNLEALPCASFEDVIEAVRAGDAQQAMVPVENSTYGR CCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCCCCH VADIHRLLPESGLHIVDEAFVRVHINLLAVPGATLENVTEAHSHLVLLPQCSKFLAKNGI HHHHHHHCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHCEEECHHHHHHHHCCCC KGRVSSDNARAARDVADWADPSKAALASELAGEIYGLNALARHIEDHDRNTTRFLVMAPD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ADMTRRAERMMTTFVFRVRNIPAALYKAMGGFATNSVNMTKLESYMVDGSFTATQFYSDI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHC EGHPDDANVQLAMEELGYFTDQLKILGTYPADAARD CCCCCCCCCEEHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]