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The map label for this gene is yiaN [C]

Identifier: 89056282

GI number: 89056282

Start: 3875636

End: 3877417

Strand: Direct

Name: yiaN [C]

Synonym: Jann_3791

Alternate gene names: 89056282

Gene position: 3875636-3877417 (Clockwise)

Preceding gene: 89056281

Following gene: 89056283

Centisome position: 89.76

GC content: 61.78

Gene sequence:

>1782_bases
ATGGCTGTCGGGCGGGCTTGCGGCTGTGGGCGCGCTCAGCATTATCGGATTGATGGGGATTACCCTGGTGGCGGTGGTCT
GGCGCTACTGGTTCCGGGCGCCGATCTCGGGCACCGGGGATATCTCGCAGATGATGCTGATTATCGTGGCAGGTGCCGCT
GTGGCCTACGGCGCACGGCATCAGGCCCATGTCAGCGTCGATCTGATCGCGCCTCTTGGGCGGCGTGTCACGCGCATCAC
CGATATCGTGATGCGGGGGCTGACGTTGTTCATCATCGGGCTGTCCGTTTACGCCTTGATGGACAAGGCCTGCGGGATGG
AGCGGGCCTGCATCACCTCGACCCTGTCGATCGAGCATCGTCCGTTCTACTGGTATCTGGCCGTCGCCATGGCCGTCTAC
GCCGCACAGGTGGCCGTGCATTTGGGCATTGGCATCGCCACCTTCCGGGGCACAGATCCAACCGAGGTCAATTCCTGATG
GATCCATCGACAATCGGCTTTGTCGGCTTCGGCCTTCTGTTCGTCCTGCTGCTTATCCGCATGCCTGTGGGCGCGGCGAT
GATGCTGGTGGGCACCGCTGGCATCTGGATGATCCGCGAACGCGCGGCGATCCCCAAGCTGGCGGGCGAGATTTTCAACG
AGGCGTCGAACTATCCGCTGACGATCATCCCGCTGTTTGTTCTGATGGGCAATCTTGCCGGTGTATCGGGGATGAGCCGG
GATCTGTATACCGCCGCCCATGCCTGGCTTGGTCATATGAAGGGTGGGCTGGCATCTGCCACAATCGTTGGCTGCGCGGG
GTTTTCGGCGCTGTCAGGCTCCTCGCTGGCGGCTGCGCTGACGATGGGGCGCGTCGCCCTGCCCGAAATGCAGCGCTACA
AGTATGACAATGGCCTGGCGACCGGCGCCATCGCGGCGGGGGGCACCTTGGGCATCCTCATCCCCCCATCGGCGGGCTTC
GTCGTCTATGCCATTCTGACCGAAGAAAGCATCGGGCGGCTGTTCATGGCCGGCGTCCTGCCGGGGCTGATGCTGACGTC
GCTGTTCATCTTCGCGATCTGGCTGTCGGTCCTGCGCAAACCCGAGCGCGCGCCCGCCGCAGCAGAACGTATGCCCATCG
GTCAGCGGTTCAGCGCACTATTCCGGTCCTTCTGGATCATCGGCATTATCGTGGCGACTATCGGCGGCATCTACACCGGC
GTCTTTTCAGCGGTGGAGGCCGCAGGCGTCGGCGCATTCCTCGCCCTTCTGGTGACGCTGATCCGGGGCACGATGACCTG
GGCCAACATGGTCGATGTGTTTACCAGCACGCTGAAATCCACAGGTACCGTCTTTCTGATCCTGTTCGGCGCCTTCGTGT
TCAAATCCTTCGTGGGTTTTACCGGCATCACCATCACCCTGTCGGAATGGGTCGCGGTGCAGGGGTTCACGGGGTTTCAG
ATTGTCGTGGCCTTCCTGTTGCTGTTCATCGTGCTTGGCATGTTCATGGAAGGCTTCGCGATCCTCGTGCTAACGGTGCC
GCTGATCCAGCCAATCATCCAGCCGCTTGGCATCGACATGATCTGGTTTGGTGTCCTGATGGTTATCGTGCTGGAAATGG
GGCTGATCTCCCCGCCCGTGGGCGTCAACGTCTTCGTGGTGAAGGGCATTGCGCGCGACGTGCCGCTCAACACCATCTTC
CGGGGCATCTGGCCGTTCTGGTTCGCCATGTTGGCCGCCGTCCTGCTGATCCTCACCTTCCCGCAAATCGCATTGCTCCT
GCCCAACACGATGTTCGGCTAG

Upstream 100 bases:

>100_bases
GCAGGCGCGATCATGGACATCATGATCGGCGAATGACCATGCACGAGACGCCCCATGACCACGTTCCCGGCCCGCTGGGC
GCGGCGGACCGGGTGCTTCG

Downstream 100 bases:

>100_bases
GCAGGCGCACGTCCCGAAAGGAGCTGTCCCATGAAACACGCAGAAGACATCATCGGCAAAGCCCATACTGCCCCCTTCTA
CAAGGTCGCCAATCCGGGCG

Product: TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MAVGRACGCGRAQHYRIDGDYPGGGGLALLVPGADLGHRGYLADDADYRGRCRCGLRRTASGPCQRRSDRASWAACHAHH
RYRDAGADVVHHRAVRLRLDGQGLRDGAGLHHLDPVDRASSVLLVSGRRHGRLRRTGGRAFGHWHRHLPGHRSNRGQFLM
DPSTIGFVGFGLLFVLLLIRMPVGAAMMLVGTAGIWMIRERAAIPKLAGEIFNEASNYPLTIIPLFVLMGNLAGVSGMSR
DLYTAAHAWLGHMKGGLASATIVGCAGFSALSGSSLAAALTMGRVALPEMQRYKYDNGLATGAIAAGGTLGILIPPSAGF
VVYAILTEESIGRLFMAGVLPGLMLTSLFIFAIWLSVLRKPERAPAAAERMPIGQRFSALFRSFWIIGIIVATIGGIYTG
VFSAVEAAGVGAFLALLVTLIRGTMTWANMVDVFTSTLKSTGTVFLILFGAFVFKSFVGFTGITITLSEWVAVQGFTGFQ
IVVAFLLLFIVLGMFMEGFAILVLTVPLIQPIIQPLGIDMIWFGVLMVIVLEMGLISPPVGVNVFVVKGIARDVPLNTIF
RGIWPFWFAMLAAVLLILTFPQIALLLPNTMFG

Sequences:

>Translated_593_residues
MAVGRACGCGRAQHYRIDGDYPGGGGLALLVPGADLGHRGYLADDADYRGRCRCGLRRTASGPCQRRSDRASWAACHAHH
RYRDAGADVVHHRAVRLRLDGQGLRDGAGLHHLDPVDRASSVLLVSGRRHGRLRRTGGRAFGHWHRHLPGHRSNRGQFLM
DPSTIGFVGFGLLFVLLLIRMPVGAAMMLVGTAGIWMIRERAAIPKLAGEIFNEASNYPLTIIPLFVLMGNLAGVSGMSR
DLYTAAHAWLGHMKGGLASATIVGCAGFSALSGSSLAAALTMGRVALPEMQRYKYDNGLATGAIAAGGTLGILIPPSAGF
VVYAILTEESIGRLFMAGVLPGLMLTSLFIFAIWLSVLRKPERAPAAAERMPIGQRFSALFRSFWIIGIIVATIGGIYTG
VFSAVEAAGVGAFLALLVTLIRGTMTWANMVDVFTSTLKSTGTVFLILFGAFVFKSFVGFTGITITLSEWVAVQGFTGFQ
IVVAFLLLFIVLGMFMEGFAILVLTVPLIQPIIQPLGIDMIWFGVLMVIVLEMGLISPPVGVNVFVVKGIARDVPLNTIF
RGIWPFWFAMLAAVLLILTFPQIALLLPNTMFG
>Mature_592_residues
AVGRACGCGRAQHYRIDGDYPGGGGLALLVPGADLGHRGYLADDADYRGRCRCGLRRTASGPCQRRSDRASWAACHAHHR
YRDAGADVVHHRAVRLRLDGQGLRDGAGLHHLDPVDRASSVLLVSGRRHGRLRRTGGRAFGHWHRHLPGHRSNRGQFLMD
PSTIGFVGFGLLFVLLLIRMPVGAAMMLVGTAGIWMIRERAAIPKLAGEIFNEASNYPLTIIPLFVLMGNLAGVSGMSRD
LYTAAHAWLGHMKGGLASATIVGCAGFSALSGSSLAAALTMGRVALPEMQRYKYDNGLATGAIAAGGTLGILIPPSAGFV
VYAILTEESIGRLFMAGVLPGLMLTSLFIFAIWLSVLRKPERAPAAAERMPIGQRFSALFRSFWIIGIIVATIGGIYTGV
FSAVEAAGVGAFLALLVTLIRGTMTWANMVDVFTSTLKSTGTVFLILFGAFVFKSFVGFTGITITLSEWVAVQGFTGFQI
VVAFLLLFIVLGMFMEGFAILVLTVPLIQPIIQPLGIDMIWFGVLMVIVLEMGLISPPVGVNVFVVKGIARDVPLNTIFR
GIWPFWFAMLAAVLLILTFPQIALLLPNTMFG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=391, Percent_Identity=28.1329923273657, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 63678; Mature: 63547

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGRACGCGRAQHYRIDGDYPGGGGLALLVPGADLGHRGYLADDADYRGRCRCGLRRTA
CCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC
SGPCQRRSDRASWAACHAHHRYRDAGADVVHHRAVRLRLDGQGLRDGAGLHHLDPVDRAS
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHCC
SVLLVSGRRHGRLRRTGGRAFGHWHRHLPGHRSNRGQFLMDPSTIGFVGFGLLFVLLLIR
CEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
MPVGAAMMLVGTAGIWMIRERAAIPKLAGEIFNEASNYPLTIIPLFVLMGNLAGVSGMSR
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCH
DLYTAAHAWLGHMKGGLASATIVGCAGFSALSGSSLAAALTMGRVALPEMQRYKYDNGLA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCHHHHHHCCCCCCC
TGAIAAGGTLGILIPPSAGFVVYAILTEESIGRLFMAGVLPGLMLTSLFIFAIWLSVLRK
CCCEECCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PERAPAAAERMPIGQRFSALFRSFWIIGIIVATIGGIYTGVFSAVEAAGVGAFLALLVTL
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGTMTWANMVDVFTSTLKSTGTVFLILFGAFVFKSFVGFTGITITLSEWVAVQGFTGFQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCHHH
IVVAFLLLFIVLGMFMEGFAILVLTVPLIQPIIQPLGIDMIWFGVLMVIVLEMGLISPPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
GVNVFVVKGIARDVPLNTIFRGIWPFWFAMLAAVLLILTFPQIALLLPNTMFG
CCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVGRACGCGRAQHYRIDGDYPGGGGLALLVPGADLGHRGYLADDADYRGRCRCGLRRTA
CCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC
SGPCQRRSDRASWAACHAHHRYRDAGADVVHHRAVRLRLDGQGLRDGAGLHHLDPVDRAS
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHCC
SVLLVSGRRHGRLRRTGGRAFGHWHRHLPGHRSNRGQFLMDPSTIGFVGFGLLFVLLLIR
CEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
MPVGAAMMLVGTAGIWMIRERAAIPKLAGEIFNEASNYPLTIIPLFVLMGNLAGVSGMSR
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCH
DLYTAAHAWLGHMKGGLASATIVGCAGFSALSGSSLAAALTMGRVALPEMQRYKYDNGLA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCHHHHHHCCCCCCC
TGAIAAGGTLGILIPPSAGFVVYAILTEESIGRLFMAGVLPGLMLTSLFIFAIWLSVLRK
CCCEECCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PERAPAAAERMPIGQRFSALFRSFWIIGIIVATIGGIYTGVFSAVEAAGVGAFLALLVTL
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGTMTWANMVDVFTSTLKSTGTVFLILFGAFVFKSFVGFTGITITLSEWVAVQGFTGFQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCHHH
IVVAFLLLFIVLGMFMEGFAILVLTVPLIQPIIQPLGIDMIWFGVLMVIVLEMGLISPPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
GVNVFVVKGIARDVPLNTIFRGIWPFWFAMLAAVLLILTFPQIALLLPNTMFG
CCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]