Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056283

Identifier: 89056283

GI number: 89056283

Start: 3877448

End: 3878638

Strand: Direct

Name: 89056283

Synonym: Jann_3792

Alternate gene names: NA

Gene position: 3877448-3878638 (Clockwise)

Preceding gene: 89056282

Following gene: 89056290

Centisome position: 89.8

GC content: 62.72

Gene sequence:

>1191_bases
ATGAAACACGCAGAAGACATCATCGGCAAAGCCCATACTGCCCCCTTCTACAAGGTCGCCAATCCGGGCGATATCGGCCT
GGACCTGCCCGACATCCGCCATGGCGATGCCGTACGGTGCTGGGTCAACGCGCTGGCCGGGTTCCAGAAAGAGGCGCTGG
TTGGCTCTGCCCGGTCCGACAACGTCTGGCGATTGGTCTCTGATGAAGGCGCATACCTGAACGGCCACGACGCCGCCCCC
TGCCCGCTGTCGTTCCTCAGCACAGGCATGGTCGCCAGCTACATGAACGAGATCATGGCATTGGCCAAACAGCAGGGCGT
GGAGCTGCGCAAGCTGCGGCTGATCCAGAACAACTACTACACGATGCAGGGGTCCATGCGGAAGCGGACGATGACCGGCG
GCGCGCTGCCAGTCGAGCTGGAAGTCCAGTGTGAGTGTGATCTGGATGACGCTGCCTTGCAGGAGTTGGTGGCGAATGCC
GTCCATGCCTCACCGCTGAATGGCCTGATGCGCGGCAAACTGCCGTCCCTGTTCACCCTGACCCGGAACGGCACGCAGAT
AGAGACCGGGGACGCAATCGCGTTGAACGCCCCCGTTGTCGGCGACCCGTCGGGTGATCCACCTCTGGCCGCAAGCAGCG
ATCTGTCCCTTATCGCCCGCGAAGGCATGTCACCCACCAAAACCGTCGCCAAGGGCACCGCGGGCTCTGCCACGTCCTTG
ACGGATGAGCAGGACCGGACGCTGAACCCCGGGGTGATCTGTACCCTGCGCGAGGATGGCATCAAGGAGATCGAACAACA
TCTGTATTCCCCCCACGGCTCCATCTTCCGCTACCTCAGCGAAGAGGCGGAGCCTGCGGGTGGCCAAGGCCGTGCGCCCG
ACGCCGTCAGCTATATCTCTGCCGGGATCGCCTTTTGTTTCATGACGCAGTTCGGGCGTATGGCCTCGATGGAGAAGCTG
GACCTGTCCCACTACTCCATTGTCCAAGACACGCATTTCTCGCTCGGCGGCGCGTCGGGTGGCACCGGCAAGGCGGGCAC
GGCAGACCCGGTCGAGACGCATGTTCACCTGCGCACGTCAGAGGCCGACGACGTGGCGCGCGACATGCTGGACGTGTCAG
AGCGGACATGTTTCCTGCATGCCTTCTGCCGGACAGACCTGAAAACCAGGCTGAAAATCACGCGGGTCTAA

Upstream 100 bases:

>100_bases
GGCCGCCGTCCTGCTGATCCTCACCTTCCCGCAAATCGCATTGCTCCTGCCCAACACGATGTTCGGCTAGGCAGGCGCAC
GTCCCGAAAGGAGCTGTCCC

Downstream 100 bases:

>100_bases
GCGCAGCTATTCTGATGCTCCAATAGCGCGGGCGAGGATTGCGTCGGCATCCGCCGTCTCGCCCGCCCAGGCCACATATC
CGTCGGGTCGGACCAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP
CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA
VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL
TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL
DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV

Sequences:

>Translated_396_residues
MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP
CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA
VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL
TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL
DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV
>Mature_396_residues
MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP
CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA
VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL
TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL
DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42539; Mature: 42539

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSD
CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCC
NVWRLVSDEGAYLNGHDAAPCPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYY
CEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE
TMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANAVHASPLNGLMRGKLPSLFTL
EEECCCHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
TRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL
ECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC
TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYIS
CCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AGIAFCFMTQFGRMASMEKLDLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTS
HHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
EADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECC
>Mature Secondary Structure
MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSD
CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCC
NVWRLVSDEGAYLNGHDAAPCPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYY
CEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE
TMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANAVHASPLNGLMRGKLPSLFTL
EEECCCHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
TRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL
ECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC
TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYIS
CCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AGIAFCFMTQFGRMASMEKLDLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTS
HHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
EADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA