| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056254
Identifier: 89056254
GI number: 89056254
Start: 3844945
End: 3845505
Strand: Direct
Name: 89056254
Synonym: Jann_3763
Alternate gene names: NA
Gene position: 3844945-3845505 (Clockwise)
Preceding gene: 89056247
Following gene: 89056255
Centisome position: 89.05
GC content: 63.99
Gene sequence:
>561_bases ATGCCGACCGTGGAGGCCCACTTACTGTCCGGCTATGACCCGGACGACAAGAGCCGGCTCGTCACGGCGCTGACGGAGGC CGTCCGATTCGTGATCCCCGCGCCCGATGAGGCGATCACGATCCTTCTGCACGAATACCCGGCTGAGAATTACGGGCGAG GCGGCCAGATGCGACCGCCCGCGCCAGCGCGCCCTGATCCGAAAGAGCTGGTTCTGGCCTATCTCGCCGCGATGGAAGCC CGTGACATCGAGGCGGCGCAATCCATGTTGGGCGACGGGTTCAAGATGACCTTCCCCGGCACTGCCCCGATGACATCGCT GGCGGAATTGATAGACTGGGCGAGGGATCGCTACACCTTCGTCCAGAAGACCTATGATGCGGTCGAAGCGTTCCAGTCCG GCCCTGTCGCCGTGGTCTATGCCCGGGGTGGGCTTTCGGGGGAATGGCCCGATGGCGCTCCGTTTTCCGGGATCCGGTTC ATTGATCGGTTTGAGGTCGCAGATGGTCTGCTGATCCGGCAGGACGTGTGGAACGATCTGGCGGAGGCGCGCGGGACATG A
Upstream 100 bases:
>100_bases GCGTCGGTCAACCCGCTACCGGGTCGGCAATGACAATATTTGCCATTTTCATATTCGCAAACCTGTTATACTTGAAATGC AGATTTTTTCGAGGACGCGC
Downstream 100 bases:
>100_bases GCGAGGATATCGATCCGATCACGTTGGCGGTTCTTGCGGGGCGGATGGAGCAAATTGCCGATGAGATGGACGCGACCCTG TTTCGCGCCGCCTTCAACCC
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: Tautomerase Family; Conserved Protein; Tautomerase
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPTVEAHLLSGYDPDDKSRLVTALTEAVRFVIPAPDEAITILLHEYPAENYGRGGQMRPPAPARPDPKELVLAYLAAMEA RDIEAAQSMLGDGFKMTFPGTAPMTSLAELIDWARDRYTFVQKTYDAVEAFQSGPVAVVYARGGLSGEWPDGAPFSGIRF IDRFEVADGLLIRQDVWNDLAEARGT
Sequences:
>Translated_186_residues MPTVEAHLLSGYDPDDKSRLVTALTEAVRFVIPAPDEAITILLHEYPAENYGRGGQMRPPAPARPDPKELVLAYLAAMEA RDIEAAQSMLGDGFKMTFPGTAPMTSLAELIDWARDRYTFVQKTYDAVEAFQSGPVAVVYARGGLSGEWPDGAPFSGIRF IDRFEVADGLLIRQDVWNDLAEARGT >Mature_185_residues PTVEAHLLSGYDPDDKSRLVTALTEAVRFVIPAPDEAITILLHEYPAENYGRGGQMRPPAPARPDPKELVLAYLAAMEAR DIEAAQSMLGDGFKMTFPGTAPMTSLAELIDWARDRYTFVQKTYDAVEAFQSGPVAVVYARGGLSGEWPDGAPFSGIRFI DRFEVADGLLIRQDVWNDLAEARGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20390; Mature: 20259
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVEAHLLSGYDPDDKSRLVTALTEAVRFVIPAPDEAITILLHEYPAENYGRGGQMRPP CCCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCHHCCCCCCCCCC APARPDPKELVLAYLAAMEARDIEAAQSMLGDGFKMTFPGTAPMTSLAELIDWARDRYTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH VQKTYDAVEAFQSGPVAVVYARGGLSGEWPDGAPFSGIRFIDRFEVADGLLIRQDVWNDL HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH AEARGT HHHCCC >Mature Secondary Structure PTVEAHLLSGYDPDDKSRLVTALTEAVRFVIPAPDEAITILLHEYPAENYGRGGQMRPP CCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCHHCCCCCCCCCC APARPDPKELVLAYLAAMEARDIEAAQSMLGDGFKMTFPGTAPMTSLAELIDWARDRYTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH VQKTYDAVEAFQSGPVAVVYARGGLSGEWPDGAPFSGIRFIDRFEVADGLLIRQDVWNDL HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH AEARGT HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA