Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056231

Identifier: 89056231

GI number: 89056231

Start: 3822987

End: 3823442

Strand: Direct

Name: 89056231

Synonym: Jann_3740

Alternate gene names: NA

Gene position: 3822987-3823442 (Clockwise)

Preceding gene: 89056230

Following gene: 89056232

Centisome position: 88.54

GC content: 57.46

Gene sequence:

>456_bases
ATGATCGCTATCTTGCTACCGATCCTCGAACTCGCCGTCCTTGCCGCCCTTGGGCTGATGGTGGGTGCGATGATCTACAC
CTCATTCGTCGAGATCCCGGTACGGCAGAAGCTTGACGGCCCCGCCCAATTGCTCAACTGGCAGCTGGTCTTTCGGGTCG
CGAGCGGTTTCCTGAAGCCCTTTGGGATTGGTCTGTTCCCGCTGTTTCTCGTCGTGTGGTTCCTATCCGGGAATTGGCTT
TGGGGGCTCTCCGCAGCCCTGCTGATTGCGATCCAGCCGTTCACGGCGCTGTTCATCGCAAAGACCAATGCAGCCCTTAT
CGAAATCAACCCCAAAGAGGCGACCGAGGCAACCAAGACGCTTATCCGCGGATGGGACCGACTTCACCACATGCGCACGG
TCCTGATCACATCTTCATTCACAATTGCGCTGATTGCGCACGTCCAGACAGCTTGA

Upstream 100 bases:

>100_bases
TCATGTGCGGGCCCAAGCCGATGATCGAGACGATCATGAAGGATCTCAAAGCCGAAGGCGTGGGCCGCAGCAAAATCCAC
ACAGAGGCTTTTGAATTCAG

Downstream 100 bases:

>100_bases
GGCTCCTATGAAAGACGCACCGTTTCAAATCACCACCACACTGATGCTGGCCTTGGGCGTATCCCTGATCGCCGGCGGTA
TTCTGGGAGCCTTGCTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIAILLPILELAVLAALGLMVGAMIYTSFVEIPVRQKLDGPAQLLNWQLVFRVASGFLKPFGIGLFPLFLVVWFLSGNWL
WGLSAALLIAIQPFTALFIAKTNAALIEINPKEATEATKTLIRGWDRLHHMRTVLITSSFTIALIAHVQTA

Sequences:

>Translated_151_residues
MIAILLPILELAVLAALGLMVGAMIYTSFVEIPVRQKLDGPAQLLNWQLVFRVASGFLKPFGIGLFPLFLVVWFLSGNWL
WGLSAALLIAIQPFTALFIAKTNAALIEINPKEATEATKTLIRGWDRLHHMRTVLITSSFTIALIAHVQTA
>Mature_151_residues
MIAILLPILELAVLAALGLMVGAMIYTSFVEIPVRQKLDGPAQLLNWQLVFRVASGFLKPFGIGLFPLFLVVWFLSGNWL
WGLSAALLIAIQPFTALFIAKTNAALIEINPKEATEATKTLIRGWDRLHHMRTVLITSSFTIALIAHVQTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16623; Mature: 16623

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAILLPILELAVLAALGLMVGAMIYTSFVEIPVRQKLDGPAQLLNWQLVFRVASGFLKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCH
FGIGLFPLFLVVWFLSGNWLWGLSAALLIAIQPFTALFIAKTNAALIEINPKEATEATKT
HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHH
LIRGWDRLHHMRTVLITSSFTIALIAHVQTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MIAILLPILELAVLAALGLMVGAMIYTSFVEIPVRQKLDGPAQLLNWQLVFRVASGFLKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCH
FGIGLFPLFLVVWFLSGNWLWGLSAALLIAIQPFTALFIAKTNAALIEINPKEATEATKT
HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHH
LIRGWDRLHHMRTVLITSSFTIALIAHVQTA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA