Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056232

Identifier: 89056232

GI number: 89056232

Start: 3823450

End: 3823854

Strand: Direct

Name: 89056232

Synonym: Jann_3741

Alternate gene names: NA

Gene position: 3823450-3823854 (Clockwise)

Preceding gene: 89056231

Following gene: 89056235

Centisome position: 88.55

GC content: 57.53

Gene sequence:

>405_bases
ATGAAAGACGCACCGTTTCAAATCACCACCACACTGATGCTGGCCTTGGGCGTATCCCTGATCGCCGGCGGTATTCTGGG
AGCCTTGCTGAGCAGCATGGGAATGATCGGGTTCTGGGGTATTTTCCTCACCGCCTTCCTGCCGGTTCCCATTGGGTCCG
TTGTGCGACAAGCCGCATCGAAATCCGCCGCAGAGCAGGCCGGTGTGAAGGCGGGCGATCCGCCAATGGCGTTCAGCCTG
CCGATCCGACTTGCCATCGGCGCGGTTGTCGCAGCAGGTGTCGCAGCAATGTTCAACTCGACTGATTTCTACACACTCGG
GCTTTTGTTGGGTGCTGTGGCCGCGCTCATGACTTCGGCTGTGTTGATACTCGTCTTTTTCCTGAAGGTCAGCATGAGCA
AGTAA

Upstream 100 bases:

>100_bases
ATCCGCGGATGGGACCGACTTCACCACATGCGCACGGTCCTGATCACATCTTCATTCACAATTGCGCTGATTGCGCACGT
CCAGACAGCTTGAGGCTCCT

Downstream 100 bases:

>100_bases
GGCTATGGCTCATCTATCATCAGCCAAGGCACGGCGGGGACATAGTTCTTACGCCGTGCCTCCGCAGACTTGCGGCCCCA
TGCCTATCAAACATGGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKDAPFQITTTLMLALGVSLIAGGILGALLSSMGMIGFWGIFLTAFLPVPIGSVVRQAASKSAAEQAGVKAGDPPMAFSL
PIRLAIGAVVAAGVAAMFNSTDFYTLGLLLGAVAALMTSAVLILVFFLKVSMSK

Sequences:

>Translated_134_residues
MKDAPFQITTTLMLALGVSLIAGGILGALLSSMGMIGFWGIFLTAFLPVPIGSVVRQAASKSAAEQAGVKAGDPPMAFSL
PIRLAIGAVVAAGVAAMFNSTDFYTLGLLLGAVAALMTSAVLILVFFLKVSMSK
>Mature_134_residues
MKDAPFQITTTLMLALGVSLIAGGILGALLSSMGMIGFWGIFLTAFLPVPIGSVVRQAASKSAAEQAGVKAGDPPMAFSL
PIRLAIGAVVAAGVAAMFNSTDFYTLGLLLGAVAALMTSAVLILVFFLKVSMSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13637; Mature: 13637

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDAPFQITTTLMLALGVSLIAGGILGALLSSMGMIGFWGIFLTAFLPVPIGSVVRQAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
KSAAEQAGVKAGDPPMAFSLPIRLAIGAVVAAGVAAMFNSTDFYTLGLLLGAVAALMTSA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLILVFFLKVSMSK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKDAPFQITTTLMLALGVSLIAGGILGALLSSMGMIGFWGIFLTAFLPVPIGSVVRQAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
KSAAEQAGVKAGDPPMAFSLPIRLAIGAVVAAGVAAMFNSTDFYTLGLLLGAVAALMTSA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLILVFFLKVSMSK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA