Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056214

Identifier: 89056214

GI number: 89056214

Start: 3808421

End: 3809056

Strand: Direct

Name: 89056214

Synonym: Jann_3723

Alternate gene names: NA

Gene position: 3808421-3809056 (Clockwise)

Preceding gene: 89056213

Following gene: 89056215

Centisome position: 88.2

GC content: 61.01

Gene sequence:

>636_bases
ATGACCCTGAATATTATCGGATCCGGCTTTGGCCGGACAGGCACGATGTCGACAAAGATGGCCCTCAACCAGCTTGGCCT
GGGGACCTGCCACCACATGAGCGAGGTCATGGGCGACCCGGAACAGCCGCCGTTCTGGTCAGCATATGTCGCCGGCGAGA
GCGTCGACTGGCAGGCTGTCTTTGCCAAATACACCGCGCAGGTGGACTTTCCCGGTGCCGCCGTCTGGCCCGAGTTGGTC
CGCGCCTTTCCCAGCGCCAAGGTGATCCACACCGAACGACCGGAAGAGGATTGGTGGGCCAGCTACTCCAAAACGATTGG
CAAATTCTGGCTGCATTACAAAGCGCAACCCATGCCGCCCGAAATGATCGAATTTTTCGGCGCAATGGACACGTTGATCC
GAAAAGGGGTGTTCGGCGGGTCAGACCGCGAGACCTGCATCGCCGCGTACCGGCGCAACAATGCCTTGGTTCGCGAAACC
GTCCCGTCCAACAGGCTTTTGGTCTTCACGCCGTCAGATGGGTGGGAGCCGCTGTGTCGGTTCTTGGACGTGCCCGTGCC
CGATGGTGATTTCCCGCGCAGCAACAGTCGCGATGAATTCTGGGCCCAGCTCGGCGGCGAACCTGCGGAGGCCTGA

Upstream 100 bases:

>100_bases
ACCTGCGGACGTCTGAAGCGGGGCCAGCCCCGCGCTGGCCAGACGCTCCAGAAGATCCGCCCCAAAAAAACCTGTAACAC
CAGATGGAAGTGAATTGCCC

Downstream 100 bases:

>100_bases
ACACCCCGCCGTTGCGGTGGGACCCGCACACACCAATCCACAGAAAGAAACAACCTATTGACCCAGACACGTAACAAAGG
AACCTCTGAGACCAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELV
RAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRET
VPSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA

Sequences:

>Translated_211_residues
MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELV
RAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRET
VPSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA
>Mature_210_residues
TLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAVFAKYTAQVDFPGAAVWPELVR
AFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPPEMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETV
PSNRLLVFTPSDGWEPLCRFLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23597; Mature: 23466

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAV
CEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FAKYTAQVDFPGAAVWPELVRAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPP
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
EMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETVPSNRLLVFTPSDGWEPLCR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHH
FLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA
HHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLNIIGSGFGRTGTMSTKMALNQLGLGTCHHMSEVMGDPEQPPFWSAYVAGESVDWQAV
EEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FAKYTAQVDFPGAAVWPELVRAFPSAKVIHTERPEEDWWASYSKTIGKFWLHYKAQPMPP
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
EMIEFFGAMDTLIRKGVFGGSDRETCIAAYRRNNALVRETVPSNRLLVFTPSDGWEPLCR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHH
FLDVPVPDGDFPRSNSRDEFWAQLGGEPAEA
HHCCCCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA