Click here to switch to the map view.

The map label for this gene is 89056213

Identifier: 89056213

GI number: 89056213

Start: 3807692

End: 3808336

Strand: Direct

Name: 89056213

Synonym: Jann_3722

Alternate gene names: NA

Gene position: 3807692-3808336 (Clockwise)

Preceding gene: 89056212

Following gene: 89056214

Centisome position: 88.18

GC content: 59.84

Gene sequence:

>645_bases
ATGACACTGCAAATCATCGGGACTGGCCTGAGCCGCACAGGCACCATGTCGACGAGACTGGCCTTGCAAGAATTGGGCTT
CGGACCTTGCCACCACATGATGGAGCTGTTCGCCGACCCCGACCAGGTCGCGATCTGGACCGACGTGGCGCGCAATGGTG
CGGCTGATTGGAACGCGGTCTTCGCCGGTTACAACGCGCAGGTCGATTTTCCGGGCGGTCGGGTGTGGACGCAAACCATT
GAGGCGTTTCCCGAGGCCCGCGTGGTGCATACCGAGCGACCTGAGGAAGACTGGTGGGCCAGTTTCAGCAAAACCGTGCT
CAAGGTCTGGGCCAATCACGAAAGGCTGACGCGGGAGATGCCGAAGCACATTCAGGACATCTTTGTGAACCTGACCCCGT
TCTACATCGACGATACGTTCGGCGGAATGCCGGACAAGGAGATGGCGATTGCCGCCTATCGTCGAACCAATCGCGAGGTC
CGCGAGACAGTCGCGCCCGACCGTCTGCTGGTCTTCACGCCTTCGGATGGTTGGGGGCCGCTGTGCGATTTTCTGCACGT
GCCCGTTCCGAACACTCCGTTCCCAAGAAGCAACGGCCGCGATGAATTCTGGTCAAATTTTGATCACGAACCTGCGGACG
TCTGA

Upstream 100 bases:

>100_bases
CTGTCGTCACGGCGATGGCTCCAAGCGACCTGATCCCAGTCAGTGGCGCGGGGCGTGGCTTTGGCACGGCGTTCAACATC
ATGAAAAGGAACTCAATCAC

Downstream 100 bases:

>100_bases
AGCGGGGCCAGCCCCGCGCTGGCCAGACGCTCCAGAAGATCCGCCCCAAAAAAACCTGTAACACCAGATGGAAGTGAATT
GCCCATGACCCTGAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTLQIIGTGLSRTGTMSTRLALQELGFGPCHHMMELFADPDQVAIWTDVARNGAADWNAVFAGYNAQVDFPGGRVWTQTI
EAFPEARVVHTERPEEDWWASFSKTVLKVWANHERLTREMPKHIQDIFVNLTPFYIDDTFGGMPDKEMAIAAYRRTNREV
RETVAPDRLLVFTPSDGWGPLCDFLHVPVPNTPFPRSNGRDEFWSNFDHEPADV

Sequences:

>Translated_214_residues
MTLQIIGTGLSRTGTMSTRLALQELGFGPCHHMMELFADPDQVAIWTDVARNGAADWNAVFAGYNAQVDFPGGRVWTQTI
EAFPEARVVHTERPEEDWWASFSKTVLKVWANHERLTREMPKHIQDIFVNLTPFYIDDTFGGMPDKEMAIAAYRRTNREV
RETVAPDRLLVFTPSDGWGPLCDFLHVPVPNTPFPRSNGRDEFWSNFDHEPADV
>Mature_213_residues
TLQIIGTGLSRTGTMSTRLALQELGFGPCHHMMELFADPDQVAIWTDVARNGAADWNAVFAGYNAQVDFPGGRVWTQTIE
AFPEARVVHTERPEEDWWASFSKTVLKVWANHERLTREMPKHIQDIFVNLTPFYIDDTFGGMPDKEMAIAAYRRTNREVR
ETVAPDRLLVFTPSDGWGPLCDFLHVPVPNTPFPRSNGRDEFWSNFDHEPADV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24366; Mature: 24234

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQIIGTGLSRTGTMSTRLALQELGFGPCHHMMELFADPDQVAIWTDVARNGAADWNAV
CEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCEE
FAGYNAQVDFPGGRVWTQTIEAFPEARVVHTERPEEDWWASFSKTVLKVWANHERLTREM
EECCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
PKHIQDIFVNLTPFYIDDTFGGMPDKEMAIAAYRRTNREVRETVAPDRLLVFTPSDGWGP
HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCH
LCDFLHVPVPNTPFPRSNGRDEFWSNFDHEPADV
HHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
TLQIIGTGLSRTGTMSTRLALQELGFGPCHHMMELFADPDQVAIWTDVARNGAADWNAV
EEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCEE
FAGYNAQVDFPGGRVWTQTIEAFPEARVVHTERPEEDWWASFSKTVLKVWANHERLTREM
EECCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
PKHIQDIFVNLTPFYIDDTFGGMPDKEMAIAAYRRTNREVRETVAPDRLLVFTPSDGWGP
HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCH
LCDFLHVPVPNTPFPRSNGRDEFWSNFDHEPADV
HHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA